Evidence map›Paper›PMID 27938668›Full record

ArticleeLife2016

Cellular encoding of Cy dyes for single-molecule imaging.

Lilia Leisle, Rahul Chadda, John D Lueck, Daniel T Infield, Jason D Galpin, Venkatramanan Krishnamani, Janice L Robertson, Christopher A Ahern

Open access · goldAbstract read
In one paragraph

Article in eLife, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Divergent CleLife · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Quantifying Single mRNA Translation Kinetics in Living Cells.Cold Spring Harbor perspectives in biology · 2018
    Review
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Lilia LeisleDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.
Rahul ChaddaDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.
John D LueckDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.
Daniel T InfieldDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.
Jason D GalpinDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.
Venkatramanan KrishnamaniDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.
Janice L RobertsonDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.ORCID 0000-0002-5499-9943
Christopher A AhernDepartment of Molecular Physiology and Biophysics, University of Iowa Carver College of Medicine, Iowa City, United States.ORCID 0000-0002-7975-2744
University of Iowa · US

Funding

Synthetic Antigen Binder CoreU54GM087519 · NIGMS · UNIVERSITY OF CHICAGO · PI MADUKE, MERRITT C · 2010 to 2017
$31.9M
Driving forces of membrane protein assembly in membranesR01GM120260 · NIGMS · WASHINGTON UNIVERSITY · PI ROBERTSON, JANICE L · 2016 to 2024
$3.4M
Chemical Biology of Voltage-Gated Sodium and Potassium ChannelsR01GM106569 · NIGMS · UNIVERSITY OF IOWA · PI AHERN, CHRISTOPHER A · 2013 to 2022
$2.7M
Reversible dimerization of a CLC transporter: A model for membrane protein foldinR00GM101016 · NIGMS · UNIVERSITY OF IOWA · PI ROBERTSON, JANICE L · 2013 to 2015
$727k
Reversible dimerization of a CLC transporter: A model for membrane protein foldinK99GM101016 · NIGMS · BRANDEIS UNIVERSITY · PI ROBERTSON, JANICE L · 2012 to 2013
$105k
NIGMS NIH HHS K99 GM101016NIGMS NIH HHS R00 GM101016NIGMS NIH HHS R01 GM106569NIGMS NIH HHS R01 GM120260NIGMS NIH HHS U54 GM087519
6 · The paper itself

Abstract

A general method is described for the site-specific genetic encoding of cyanine dyes as non-canonical amino acids (Cy-ncAAs) into proteins. The approach relies on an improved technique for nonsense suppression with in vitro misacylated orthogonal tRNA. The data show that Cy-ncAAs (based on Cy3 and Cy5) are tolerated by the eukaryotic ribosome in cell-free and whole-cell environments and can be incorporated into soluble and membrane proteins. In the context of the

Indexed as

AnimalsCarbocyaninesGene ExpressionLuminescent ProteinsMicroscopy, FluorescenceRecombinant ProteinsSingle Molecule ImagingXenopus laevisCarbocyaninesLuminescent ProteinsRecombinant Proteinsbiochemistrybiophysicscell-free protein synthesisgenetic code expansionmembrane proteinsorthogonal tRNAsingle molecule imagingstructural biologyTIRFxenopus

Identifiers

PMID27938668
PMCPMC5207767
OpenAlexW2565335750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.