Evidence map›Paper›PMID 27935966›Full record

ArticlePLoS genetics2016

The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets.

Mark P Keller, Pradyut K Paul, Mary E Rabaglia, Donnie S Stapleton, Kathryn L Schueler, Aimee Teo Broman, Shuyun Isabella Ye, Ning Leng, Christopher J Brandon, Elias Chaibub Neto and 11 more

Abstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Dual role of neuroplastin in pancreatic β cells: Regulating insulin secretion and promoting islet inflammation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Zinc-chelating BET bromodomain inhibitors equally target islet endocrine cell types.American journal of physiology. Regulatory, integrative and comparative physiology · 2024
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Dynamic changes in β-cell [CaMolecular metabolism · 2022
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Near-UV Light Induced ROS Production Initiates Spatial CaInternational journal of molecular sciences · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Mark P KellerDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-7405-5552
Pradyut K PaulDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-9922-4877
Mary E RabagliaDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.
Donnie S StapletonDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-7108-3718
Kathryn L SchuelerDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.
Aimee Teo BromanDepartment of Biostatistics & Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0003-3783-2807
Shuyun Isabella YeDepartment of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America.
Ning LengDepartment of Biostatistics & Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America.
Christopher J BrandonDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0001-6077-4081
Elias Chaibub NetoSage Bionetworks, Seattle, Washington.
Christopher L PlaisierInstitute for Systems Biology, Seattle, Washington.
Shane P SimonettDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-9359-7808
Melkam A KebedeDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.
Gloria M SheynkmanDepartment of Chemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-4223-9947
Mark A KleinDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.
Nitin S BaligaInstitute for Systems Biology, Seattle, Washington.
Lloyd M SmithDepartment of Chemistry, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-6652-8639
Karl W BromanDepartment of Biostatistics & Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-4914-6671
Brian S YandellDepartment of Statistics, University of Wisconsin, Madison, Wisconsin, United States of America.ORCID http://orcid.org/0000-0002-8774-9377
Christina KendziorskiDepartment of Biostatistics & Medical Informatics, University of Wisconsin, Madison, Wisconsin, United States of America.
Alan D AttieDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin, United States of America.

Funding

Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
Quantitative Systems BiologyP50GM076547 · NIGMS · INSTITUTE FOR SYSTEMS BIOLOGY · PI AITCHISON, JOHN D. · 2006 to 2016
$30.6M
Institutional Training in the Genomic SciencesT32HG002760 · NHGRI · UNIVERSITY OF WISCONSIN-MADISON · PI Qiongshi Lu · 2003 to 2026
$17.7M
Training Program in Translational Cardiovascular Science (TPTCS)T32HL007936 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Lee Lochbaum Eckhardt, Gail A Robertson · 2001 to 2026
$11.6M
The Epigenotype of Human ES CellsP01GM081629 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI THOMSON, JAMES ALEXANDER · 2008 to 2012
$8.9M
Systems Genetic Analysis of Multi-parent CrossesR01GM070683 · NIGMS · JACKSON LABORATORY · PI BROMAN, KARL W, CHURCHILL, GARY A · 2004 to 2022
$6.8M
Genetic Mapping of Networks Associated with Beta-cell D*R01DK066369 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI ATTIE, ALAN D · 2004 to 2014
$6.3M
The Genetics of Obesity and DiabetesR01DK058037 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI ATTIE, ALAN D · 2001 to 2013
$5.7M
The Diversity Outbred Diabetes ProjectR01DK101573 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Alan D Attie · 2014 to 2026
$5.3M
Statistical methods for spatial RNA sequencing experimentsR01GM102756 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KENDZIORSKI, CHRISTINA · 2012 to 2024
$3.8M
QPASS: Quantitative Parallel Aptamer Selection SystemU54DK093467 · NIDDK · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SMITH, LLOYD M, SOH, HYONGSOK TOM · 2011 to 2013
$3.2M
Statistical Methods and Software for QTL MappingR01GM074244 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BROMAN, KARL W · 2005 to 2013
$2.3M
NCATS NIH HHS UL1 TR000427NHGRI NIH HHS T32 HG002760NHLBI NIH HHS T32 HL007936NIDDK NIH HHS R01 DK058037NIDDK NIH HHS R01 DK066369NIDDK NIH HHS R01 DK101573NIDDK NIH HHS U54 DK093467NIGMS NIH HHS P01 GM081629NIGMS NIH HHS P50 GM076547NIGMS NIH HHS R01 GM070683NIGMS NIH HHS R01 GM074244NIGMS NIH HHS R01 GM077398NIGMS NIH HHS R01 GM102756
6 · The paper itself

Abstract

Human genome-wide association studies (GWAS) have shown that genetic variation at >130 gene loci is associated with type 2 diabetes (T2D). We asked if the expression of the candidate T2D-associated genes within these loci is regulated by a common locus in pancreatic islets. Using an obese F2 mouse intercross segregating for T2D, we show that the expression of ~40% of the T2D-associated genes is linked to a broad region on mouse chromosome (Chr) 2. As all but 9 of these genes are not physically located on Chr 2, linkage to Chr 2 suggests a genomic factor(s) located on Chr 2 regulates their expression in trans. The transcription factor Nfatc2 is physically located on Chr 2 and its expression demonstrates cis linkage; i.e., its expression maps to itself. When conditioned on the expression of Nfatc2, linkage for the T2D-associated genes was greatly diminished, supporting Nfatc2 as a driver of their expression. Plasma insulin also showed linkage to the same broad region on Chr 2. Overexpression of a constitutively active (ca) form of Nfatc2 induced β-cell proliferation in mouse and human islets, and transcriptionally regulated more than half of the T2D-associated genes. Overexpression of either ca-Nfatc2 or ca-Nfatc1 in mouse islets enhanced insulin secretion, whereas only ca-Nfatc2 was able to promote β-cell proliferation, suggesting distinct molecular pathways mediating insulin secretion vs. β-cell proliferation are regulated by NFAT. Our results suggest that many of the T2D-associated genes are downstream transcriptional targets of NFAT, and may act coordinately in a pathway through which NFAT regulates β-cell proliferation in both mouse and human islets.

Indexed as

AnimalsCell ProliferationChromosome MappingDiabetes Mellitus, Type 2Gene Expression RegulationGenetic LinkageGenomeGenome-Wide Association StudyHumansInsulinInsulin-Secreting CellsIslets of LangerhansMiceMice, ObeseNFATC Transcription FactorsPromoter Regions, GeneticInsulinNfatc1 protein, mouseNfatc2 protein, mouseNFATC Transcription Factors

Identifiers

PMID27935966
PMCPMC5147809

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.