Evidence map›Paper›PMID 27935964›Full record

ArticlePLoS genetics2016

GW182-Free microRNA Silencing Complex Controls Post-transcriptional Gene Expression during Caenorhabditis elegans Embryogenesis.

Guillaume Jannot, Pascale Michaud, Miguel Quévillon Huberdeau, Louis Morel-Berryman, James A Brackbill, Sandra Piquet, Katherine McJunkin, Kotaro Nakanishi, Martin J Simard

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

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  12. The multifaceted roles of microRNAs in differentiation.Current opinion in cell biology · 2020
    Review
  13. MicroRNAs: From Mechanism to Organism.Frontiers in cell and developmental biology · 2020
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Guillaume JannotSt-Patrick Research Group in Basic Oncology, CHU de Québec-Université Laval Research Centre (Hôtel-Dieu de Québec), Quebec City, Québec, Canada.
Pascale MichaudSt-Patrick Research Group in Basic Oncology, CHU de Québec-Université Laval Research Centre (Hôtel-Dieu de Québec), Quebec City, Québec, Canada.
Miguel Quévillon HuberdeauSt-Patrick Research Group in Basic Oncology, CHU de Québec-Université Laval Research Centre (Hôtel-Dieu de Québec), Quebec City, Québec, Canada.
Louis Morel-BerrymanSt-Patrick Research Group in Basic Oncology, CHU de Québec-Université Laval Research Centre (Hôtel-Dieu de Québec), Quebec City, Québec, Canada.
James A BrackbillDepartment of Chemistry & Biochemistry, The Ohio State University, Columbus, Ohio, United States of America.
Sandra PiquetSt-Patrick Research Group in Basic Oncology, CHU de Québec-Université Laval Research Centre (Hôtel-Dieu de Québec), Quebec City, Québec, Canada.ORCID http://orcid.org/0000-0002-5745-9862
Katherine McJunkinProgram in Molecular Medicine, RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Kotaro NakanishiDepartment of Chemistry & Biochemistry, The Ohio State University, Columbus, Ohio, United States of America.
Martin J SimardSt-Patrick Research Group in Basic Oncology, CHU de Québec-Université Laval Research Centre (Hôtel-Dieu de Québec), Quebec City, Québec, Canada.
Hôtel-Dieu de Québec · CAThe Ohio State University · USUniversity of Massachusetts Chan Medical School · US

Funding

Molecular Mechanisms of microRNA and miRISC turnoverK99GM113063 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MCJUNKIN, KATHERINE · 2015 to 2016
$162k
Genetic analysis of post-transcriptional modulators of microRNAs in C. elegansF32GM097895 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MCJUNKIN, KATHERINE · 2011 to 2013
$155k
NIGMS NIH HHS F32 GM097895NIGMS NIH HHS K99 GM113063
6 · The paper itself

Abstract

MicroRNAs and Argonaute form the microRNA induced silencing complex or miRISC that recruits GW182, causing mRNA degradation and/or translational repression. Despite the clear conservation and molecular significance, it is unknown if miRISC-GW182 interaction is essential for gene silencing during animal development. Using Caenorhabditis elegans to explore this question, we examined the relationship and effect on gene silencing between the GW182 orthologs, AIN-1 and AIN-2, and the microRNA-specific Argonaute, ALG-1. Homology modeling based on human Argonaute structures indicated that ALG-1 possesses conserved Tryptophan-binding Pockets required for GW182 binding. We show in vitro and in vivo that their mutations severely altered the association with AIN-1 and AIN-2. ALG-1 tryptophan-binding pockets mutant animals retained microRNA-binding and processing ability, but were deficient in reporter silencing activity. Interestingly, the ALG-1 tryptophan-binding pockets mutant phenocopied the loss of alg-1 in worms during larval stages, yet was sufficient to rescue embryonic lethality, indicating the dispensability of AINs association with the miRISC at this developmental stage. The dispensability of AINs in miRNA regulation is further demonstrated by the capacity of ALG-1 tryptophan-binding pockets mutant to regulate a target of the embryonic mir-35 microRNA family. Thus, our results demonstrate that the microRNA pathway can act independently of GW182 proteins during C. elegans embryogenesis.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsEmbryonic DevelopmentGene Expression Regulation, DevelopmentalHumansMicroRNAsMutationRNA-Binding ProteinsRNA-Induced Silencing ComplexRNA InterferenceAIN-1 protein, C elegansAIN-2 protein, C elegansALG-1 protein, C elegansCaenorhabditis elegans ProteinsCarrier ProteinsGW182 protein, C elegansMicroRNAsMIRN35 microRNA, C elegansRNA-Binding ProteinsRNA-Induced Silencing Complex

Identifiers

PMID27935964
PMCPMC5147811
OpenAlexW2560317853

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.