Evidence map›Paper›PMID 27935957›Full record

ArticlePLoS genetics2016

Intracellular Zn(II) Intoxication Leads to Dysregulation of the PerR Regulon Resulting in Heme Toxicity in Bacillus subtilis.

Pete Chandrangsu, John D Helmann

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 58 citations in OpenAlex.

  1. The genes zntA and zntR encoding a P-type ATPase and its activator confer zinc and cadmium resistance in Chromobacterium violaceum.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2026
    Article
  2. A review of the iron requirements and its determination in commercial poultry.Animal nutrition (Zhongguo xu mu shou yi xue hui) · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Microbial metal physiology: ions to ecosystems.Nature reviews. Microbiology · 2025
    Review
  7. c-di-GMP-Dependent Regulation of Motility bybioRxiv : the preprint server for biology · 2025
    Article
  8. A cytochromeApplied and environmental microbiology · 2025
    Article
  9. Review
  10. Review
  11. TheJournal of bacteriology · 2024
    Article
  12. Article
  13. ThebioRxiv : the preprint server for biology · 2024
    Article
  14. Review
  15. Zinc excess impairsMicrobiology spectrum · 2023
    Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Pete ChandrangsuDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID http://orcid.org/0000-0002-2601-7973
John D HelmannDepartment of Microbiology, Cornell University, Ithaca, New York, United States of America.ORCID http://orcid.org/0000-0002-3832-3249
Cornell University · US

Funding

Zinc Homeostasis in Bacillus subtilisR01GM059323 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HELMANN, JOHN D · 2000 to 2017
$4.5M
Investigating the role of Bacillithiol in metal ion homeostasis and the reactiveF32GM106729 · NIGMS · CORNELL UNIVERSITY · PI CHANDRANGSU, PETE · 2013 to 2014
$102k
NIGMS NIH HHS F32 GM106729NIGMS NIH HHS R01 GM059323
6 · The paper itself

Abstract

Transition metal ions (Zn(II), Cu(II)/(I), Fe(III)/(II), Mn(II)) are essential for life and participate in a wide range of biological functions. Cellular Zn(II) levels must be high enough to ensure that it can perform its essential roles. Yet, since Zn(II) binds to ligands with high avidity, excess Zn(II) can lead to protein mismetallation. The major targets of mismetallation, and the underlying causes of Zn(II) intoxication, are not well understood. Here, we use a forward genetic selection to identify targets of Zn(II) toxicity. In wild-type cells, in which Zn(II) efflux prevents intoxication of the cytoplasm, extracellular Zn(II) inhibits the electron transport chain due to the inactivation of the major aerobic cytochrome oxidase. This toxicity can be ameliorated by depression of an alternate oxidase or by mutations that restrict access of Zn(II) to the cell surface. Conversely, efflux deficient cells are sensitive to low levels of Zn(II) that do not inhibit the respiratory chain. Under these conditions, intracellular Zn(II) accumulates and leads to heme toxicity. Heme accumulation results from dysregulation of the regulon controlled by PerR, a metal-dependent repressor of peroxide stress genes. When metallated with Fe(II) or Mn(II), PerR represses both heme biosynthesis (hemAXCDBL operon) and the abundant heme protein catalase (katA). Metallation of PerR with Zn(II) disrupts this coordination, resulting in depression of heme biosynthesis but continued repression of catalase. Our results support a model in which excess heme partitions to the membrane and undergoes redox cycling catalyzed by reduced menaquinone thereby resulting in oxidative stress.

Indexed as

Bacillus subtilisBacterial ProteinsCatalaseCytoplasmElectron TransportGene Expression Regulation, BacterialHemeIronManganeseOxidative StressPeroxidesRepressor ProteinsZincBacterial ProteinsCatalaseHemeIronKATA protein, Bacillus subtilisManganeseperoxide repressor proteinsPeroxidesRepressor ProteinsZinc

Identifiers

PMID27935957
PMCPMC5189952
OpenAlexW2559863727

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.