Evidence map›Paper›PMID 27935588›Full record

ArticleThe ISME journal2017

Single-cell mass spectrometry reveals the importance of genetic diversity and plasticity for phenotypic variation in nitrogen-limited Chlamydomonas.

Jasmin Krismer, Manu Tamminen, Simone Fontana, Renato Zenobi, Anita Narwani

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

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  6. Mass spectrometry imaging to explore molecular heterogeneity in cell culture.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Microbial metabolic noise.WIREs mechanisms of disease · 2021
    Review
  8. Plant Single-Cell Metabolomics-Challenges and Perspectives.International journal of molecular sciences · 2020
    Review
  9. Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jasmin KrismerDepartment of Chemistry and Applied Biosciences (D-CHAB), ETH Zurich, Zurich, Switzerland.
Manu TamminenEawag, Swiss Federal Institute of Aquatic Science and Technology, Dubendorf, Switzerland.
Simone FontanaEawag, Swiss Federal Institute of Aquatic Science and Technology, Dubendorf, Switzerland.
Renato ZenobiDepartment of Chemistry and Applied Biosciences (D-CHAB), ETH Zurich, Zurich, Switzerland.
Anita NarwaniEawag, Swiss Federal Institute of Aquatic Science and Technology, Dubendorf, Switzerland.
Swiss Federal Institute of Aquatic Science and Technology · CHETH Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenotypic variation is vital for microbial populations to survive environmental perturbations. Both genetic and non-genetic factors contribute to an organism's phenotypic variation and therefore its fitness. To investigate the correlation between genetic diversity and phenotypic variation, we applied our recently developed mass spectrometry method that allows for the simultaneous measurement of more than 25 different lipids and pigments with high throughput in the unicellular microalga Chlamydomonas reinhardtii. We monitored the impact of nitrogen limitation on a genetically diverse wild-type strain CC-1690 and two isoclonal isolates from CC-1690 named ANC3 and ANC5. Measuring molecular composition of thousands of single cells at different time points of the experiment allowed us to capture a dynamic picture of the phenotypic composition and adaptation of the populations over time. Although the genetically diverse population maintained phenotypic variation over the whole time course of the experiment, the isoclonal cultures showed higher synchronicity in their phenotypic response. Furthermore, the genetically diverse population showed equal or greater phenotypic variation over the whole time range in multidimensional trait space compared with isoclonal populations. However, along individual trait axes non-genetic variance was higher in isoclonal populations.

Indexed as

Genetic VariationAdaptation, PhysiologicalChlamydomonas reinhardtiiGenotypeMass SpectrometryNitrogenPhenotypeNitrogen

Identifiers

PMID27935588
PMCPMC5364350
OpenAlexW2560312403

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.