Evidence map›Paper›PMID 27934859›Full record

ArticleNature communications2016

TRBP ensures efficient Dicer processing of precursor microRNA in RNA-crowded environments.

Mohamed Fareh, Kyu-Hyeon Yeom, Anna C Haagsma, Sweeny Chauhan, Inha Heo, Chirlmin Joo

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 128 citations in OpenAlex.

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  13. Competition effects regulating the composition of the microRNA pool.Journal of the Royal Society, Interface · 2025
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3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Mohamed FarehKavli Institute of NanoScience, Delft University of Technology, 2629HZ Delft, The Netherlands.
Kyu-Hyeon YeomKavli Institute of NanoScience, Delft University of Technology, 2629HZ Delft, The Netherlands.
Anna C HaagsmaKavli Institute of NanoScience, Delft University of Technology, 2629HZ Delft, The Netherlands.
Sweeny ChauhanKavli Institute of NanoScience, Delft University of Technology, 2629HZ Delft, The Netherlands.
Inha HeoKavli Institute of NanoScience, Delft University of Technology, 2629HZ Delft, The Netherlands.
Chirlmin JooKavli Institute of NanoScience, Delft University of Technology, 2629HZ Delft, The Netherlands.ORCID 0000-0003-2803-0335
Delft University of Technology · NL

Funding

European Research Council
6 · The paper itself

Abstract

The RNA-binding protein TRBP is a central component of the Dicer complex. Despite a decade of biochemical and structural studies, the essential functionality of TRBP in microRNA (miRNA) biogenesis remains unknown. Here we show that TRBP is an integral cofactor for time-efficient Dicer processing in RNA-crowded environments. We competed for Dicer processing of pre-miRNA with a large amount of cellular RNA species and found that Dicer-TRBP, but not Dicer alone, remains resilient. To apprehend the mechanism of this substrate selectivity, we use single-molecule fluorescence. The real-time observation reveals that TRBP acts as a gatekeeper, precluding Dicer from engaging with pre-miRNA-like substrates. TRBP acquires the selectivity using the PAZ domain of Dicer, whereas Dicer moderates the RNA-binding affinity of TRBP for fast turnover. This coordinated action between TRBP and Dicer accomplishes an efficient way of discarding pre-miRNA-like substrates.

Indexed as

HEK293 CellsHumansIntracellular Signaling Peptides and ProteinsMicroRNAsMultiprotein ComplexesNuclear Receptor CoactivatorsProtein BindingProtein DomainsRibonuclease IIIRNARNA-Binding ProteinsRNA PrecursorsRNA Processing, Post-TranscriptionalTranscription, GeneticIntracellular Signaling Peptides and ProteinsMicroRNAsMultiprotein ComplexesNuclear Receptor CoactivatorsRibonuclease IIIRNARNA-Binding ProteinsRNA Precursors

Identifiers

PMID27934859
PMCPMC5155159
OpenAlexW2560195344

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.