Evidence map›Paper›PMID 27932493›Full record

ArticleMolecular biology of the cell2017

PRDM9 interactions with other proteins provide a link between recombination hotspots and the chromosomal axis in meiosis.

Emil D Parvanov, Hui Tian, Timothy Billings, Ruth L Saxl, Catrina Spruce, Rakesh Aithal, Lumir Krejci, Kenneth Paigen, Petko M Petkov

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 105 citations in OpenAlex.

  1. Article
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  5. Dynamic changes in histone lysine lactylation during meiosis prophase I in mouse spermatogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  18. Genetic control of meiosis surveillance mechanisms in mammals.Frontiers in cell and developmental biology · 2023
    Review
  19. Ectopic expression of meiotic cohesin generates chromosome instability in cancer cell line.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Emil D ParvanovCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609.
Hui TianCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609.
Timothy BillingsCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609.
Ruth L SaxlCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609.
Catrina SpruceCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609.
Rakesh AithalDepartment of Biology, Masaryk University, Brno, Czech Republic 625 00.
Lumir KrejciDepartment of Biology, Masaryk University, Brno, Czech Republic 625 00 petko.petkov@jax.org lkrejci@chemi.muni.cz.
Kenneth PaigenCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609.
Petko M PetkovCenter for Genome Dynamics, Jackson Laboratory, Bar Harbor, ME 04609 petko.petkov@jax.org lkrejci@chemi.muni.cz.
Jackson Laboratory · USMasaryk University · CZ

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
UNC and PERLEGEN, IncP50GM076468 · NIGMS · JACKSON LABORATORY · PI PETKOV, PETKO M · 2006 to 2015
$31.0M
Sex-Specific Regulation of Meiotic Recombination HotspotsR01GM078452 · NIGMS · JACKSON LABORATORY · PI PETKOV, PETKO M · 2007 to 2015
$3.3M
Genomic Organization of Recombination Hot SpotsR01GM078643 · NIGMS · JACKSON LABORATORY · PI PAIGEN, KENNETH · 2006 to 2014
$2.7M
NCI NIH HHS P30 CA034196NIGMS NIH HHS P50 GM076468NIGMS NIH HHS R01 GM078452NIGMS NIH HHS R01 GM078643
6 · The paper itself

Abstract

In mammals, meiotic recombination occurs at 1- to 2-kb genomic regions termed hotspots, whose positions and activities are determined by PRDM9, a DNA-binding histone methyltransferase. We show that the KRAB domain of PRDM9 forms complexes with additional proteins to allow hotspots to proceed into the next phase of recombination. By a combination of yeast-two hybrid assay, in vitro binding, and coimmunoprecipitation from mouse spermatocytes, we identified four proteins that directly interact with PRDM9's KRAB domain, namely CXXC1, EWSR1, EHMT2, and CDYL. These proteins are coexpressed in spermatocytes at the early stages of meiotic prophase I, the limited period when PRDM9 is expressed. We also detected association of PRDM9-bound complexes with the meiotic cohesin REC8 and the synaptonemal complex proteins SYCP3 and SYCP1. Our results suggest a model in which PRDM9-bound hotspot DNA is brought to the chromosomal axis by the action of these proteins, ensuring the proper chromatin and spatial environment for subsequent recombination events.

Indexed as

AnimalsChromatinChromosomesDNADNA Breaks, Double-StrandedGenomeHistone-Lysine N-MethyltransferaseHomologous RecombinationMaleMeiosisMiceProtein DomainsRecombination, GeneticSpermatocytesChromatinDNAHistone-Lysine N-MethyltransferasePRDM9 protein, human

Identifiers

PMID27932493
PMCPMC5341731
OpenAlexW2560471559

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.