Evidence map›Paper›PMID 27930646›Full record

ArticlePLoS genetics2016

Retinal Expression of the Drosophila eyes absent Gene Is Controlled by Several Cooperatively Acting Cis-regulatory Elements.

Bonnie M Weasner, Brandon P Weasner, Sarah D Neuman, Arash Bashirullah, Justin P Kumar

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. A Genetic Screen Using theG3 (Bethesda, Md.) · 2019
    Article
  12. Article
  13. Article
  14. Polycomb group (PcG) proteins and Pax6 cooperate to inhibitDevelopment (Cambridge, England) · 2018
    Article
  15. Article
  16. Article
  17. The fly eye: Through the looking glass.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Review
  18. Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Bonnie M WeasnerDepartment of Biology, Indiana University, Bloomington, Indiana, United States of America.ORCID http://orcid.org/0000-0002-6650-4389
Brandon P WeasnerDepartment of Biology, Indiana University, Bloomington, Indiana, United States of America.ORCID http://orcid.org/0000-0003-3028-8909
Sarah D NeumanDivision of Pharmaceutical Sciences, University of Wisconsin, Madison, Wisconsin, United States of America.
Arash BashirullahDivision of Pharmaceutical Sciences, University of Wisconsin, Madison, Wisconsin, United States of America.
Justin P KumarDepartment of Biology, Indiana University, Bloomington, Indiana, United States of America.
Indiana University Bloomington · USUniversity of Wisconsin–Madison · US

Funding

Repression of Non-Ocular Fates by the SIX and EYA Genes During Specification and Patterning of the RetinaR01EY014863 · NEI · TRUSTEES OF INDIANA UNIVERSITY · PI KUMAR, JUSTIN P · 2003 to 2017
$4.3M
Genetic Analysis of Apoptosis during Drosophila DevelopmentR01GM095944 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BASHIRULLAH, ARASH · 2011 to 2015
$1.4M
NEI NIH HHS R01 EY014863NIGMS NIH HHS R01 GM095944
6 · The paper itself

Abstract

The eyes absent (eya) gene of the fruit fly, Drosophila melanogaster, is a member of an evolutionarily conserved gene regulatory network that controls eye formation in all seeing animals. The loss of eya leads to the complete elimination of the compound eye while forced expression of eya in non-retinal tissues is sufficient to induce ectopic eye formation. Within the developing retina eya is expressed in a dynamic pattern and is involved in tissue specification/determination, cell proliferation, apoptosis, and cell fate choice. In this report we explore the mechanisms by which eya expression is spatially and temporally governed in the developing eye. We demonstrate that multiple cis-regulatory elements function cooperatively to control eya transcription and that spacing between a pair of enhancer elements is important for maintaining correct gene expression. Lastly, we show that the loss of eya expression in sine oculis (so) mutants is the result of massive cell death and a progressive homeotic transformation of retinal progenitor cells into head epidermis.

Indexed as

AnimalsApoptosisCell ProliferationDrosophila melanogasterDrosophila ProteinsEyeEye ProteinsGene Expression Regulation, DevelopmentalGene Regulatory NetworksMutationOrganogenesisRegulatory Elements, TranscriptionalDrosophila Proteinseya protein, DrosophilaEye Proteins

Identifiers

PMID27930646
PMCPMC5145141
OpenAlexW2560380179

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.