Evidence map›Paper›PMID 27930288›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Experimental evolution reveals hyperparasitic interactions among transposable elements.

Émilie Robillard, Arnaud Le Rouzic, Zheng Zhang, Pierre Capy, Aurélie Hua-Van

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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  20. Cells · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Émilie RobillardÉvolution, Génomes, Comportement, Écologie, CNRS, Institut de Recherche pour le Développement, Université Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.
Arnaud Le RouzicÉvolution, Génomes, Comportement, Écologie, CNRS, Institut de Recherche pour le Développement, Université Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.
Zheng ZhangÉvolution, Génomes, Comportement, Écologie, CNRS, Institut de Recherche pour le Développement, Université Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.
Pierre CapyÉvolution, Génomes, Comportement, Écologie, CNRS, Institut de Recherche pour le Développement, Université Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.
Aurélie Hua-VanÉvolution, Génomes, Comportement, Écologie, CNRS, Institut de Recherche pour le Développement, Université Paris-Sud, Université Paris-Saclay, 91198 Gif-sur-Yvette, France aurelie.hua-van@egce.cnrs-gif.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposable elements (TEs) are repeated DNA sequences that can constitute a substantial part of genomes. Studying TEs' activity, interactions, and accumulation dynamics is thus of major interest to understand genome evolution. Here, we describe the transposition dynamics of cut-and-paste mariner elements during experimental (short- and longer-term) evolution in Drosophila melanogaster Flies with autonomous and nonautonomous mariner copies were introduced in populations containing no active mariner, and TE accumulation was tracked by quantitative PCR for up to 100 generations. Our results demonstrate that (i) active mariner elements are highly invasive and characterized by an elevated transposition rate, confirming their capacity to spread in populations, as predicted by the "selfish-DNA" mechanism; (ii) nonautonomous copies act as parasites of autonomous mariner elements by hijacking the transposition machinery produced by active mariner, which can be considered as a case of hyperparasitism; (iii) this behavior resulted in a failure of active copies to amplify which systematically drove the whole family to extinction in less than 100 generations. This study nicely illustrates how the presence of transposition-competitive variants can deeply impair TE dynamics and gives clues to the extraordinary diversity of TE evolutionary histories observed in genomes.

Indexed as

Directed Molecular EvolutionDNA Transposable ElementsGenome, InsectAnimalsDNA-Binding ProteinsDrosophila melanogasterFemaleLinear ModelsMalePhenotypePhylogenyPolymerase Chain ReactionSpecies SpecificityTransposasesDNA-Binding ProteinsDNA Transposable Elementsmariner transposasesTransposasesDrosophilaexperimental evolutionhyperparasitisminvasion dynamicstransposable elements

Identifiers

PMID27930288
PMCPMC5187678

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.