Evidence map›Paper›PMID 27929740›Full record

ArticleCell cycle (Georgetown, Tex.)2017

Role for PADI6 in securing the mRNA-MSY2 complex to the oocyte cytoplasmic lattices.

Xiaoqiu Liu, Eric Morency, Tingting Li, Hao Qin, Xiaoqian Zhang, Xuesen Zhang, Scott Coonrod

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 44 citations in OpenAlex.

  1. Pooled it
  2. Structural insight into the function of human peptidyl arginine deiminase 6.Computational and structural biotechnology journal · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. PADI6: What we know about the elusive fifth member of the peptidyl arginine deiminase family.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. A complex heterozygous mutation inFrontiers in genetics · 2022
    Article
  15. Article
  16. What defines the maternal transcriptome?Biochemical Society transactions · 2021
    Review
  17. Article
  18. Review
  19. Maternal variants inJournal of medical genetics · 2018
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Xiaoqiu Liua Key Laboratory of Pathogen Biology of Jiangsu Province , Nanjing Medical University , Nanjing , China.
Eric Morencyc Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University , Ithaca , NY USA.
Tingting Lid State Key Laboratory of Reproductive Medicine , Nanjing Medical University , Nanjing , China.
Hao Qind State Key Laboratory of Reproductive Medicine , Nanjing Medical University , Nanjing , China.
Xiaoqian Zhangd State Key Laboratory of Reproductive Medicine , Nanjing Medical University , Nanjing , China.
Xuesen Zhangd State Key Laboratory of Reproductive Medicine , Nanjing Medical University , Nanjing , China.
Scott Coonrodc Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University , Ithaca , NY USA.
Nanjing Medical University · CNCornell University · US

Funding

Reproductive Sciences and Genomics Training ProgramT32HD052471 · NICHD · CORNELL UNIVERSITY · PI ROBERSON, MARK S · 2007 to 2016
$2.0M
NICHD NIH HHS T32 HD052471
6 · The paper itself

Abstract

The oocyte cytoplasmic lattices (CPLs) have long been predicted to function as a storage form for the maternal contribution of ribosomes to the early embryo. Our previous studies have demonstrated that ribosomal component S6 is stored in the oocyte CPLs and peptidylarginine deiminase 6 (PADI6) is critical for CPLs formation. Additionally, we found that depletion of PADI6 reduced de novo protein synthesis prior to the maternal-to-embryonic transition, therefore causing embryos to arrest at the 2-cell stage. Here, we present evidence further supporting the association of ribosomes with the CPLs by demonstrating that rRNAs are dramatically decreased in Padi6 KO oocytes. We also show that the abundance and localization of mRNAs is affected upon PADI6 depletion, suggesting that mRNAs are very possibly associated with CPLs. Consistent with this observation, the amount of the major RNA binding protein, MSY2, that is associated with the insoluble fraction of the oocytes after Triton X-100 extraction is also markedly decreased in the Padi6 KO oocytes. Furthermore, treatment of the oocytes with RNase A followed by Triton X-100 extraction severely impairs the localization of PADI6 and MSY2 in oocytes. These results indicate that mRNAs, possibly in a complex with MSY2 and PADI6, are bound in the CPLs and may play a role in securing the mRNA-MSY2 complex to the CPLs.

Indexed as

AnimalsCytoplasmFemaleHydrolasesMice, KnockoutOocytesProtein-Arginine DeiminasesProtein-Arginine Deiminase Type 6RNA-Binding ProteinsRNA, MessengerRNA, RibosomalRNA TransportSolubilityHydrolasesPADI6 protein, mouseProtein-Arginine DeiminasesProtein-Arginine Deiminase Type 6RNA-Binding ProteinsRNA, MessengerRNA, RibosomalYbx2 protein, mousecytoplasmic latticeMSY2oocytePADI6ribosomal storage

Identifiers

PMID27929740
PMCPMC5324759
OpenAlexW2560399569

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.