Evidence map›Paper›PMID 27929729›Full record

ArticleAutophagy2017

FYCO1 and autophagy control the integrity of the haploid male germ cell-specific RNP granules.

Matteo Da Ros, Tiina Lehtiniemi, Opeyemi Olotu, Daniel Fischer, Fu-Ping Zhang, Helena Vihinen, Eija Jokitalo, Anu Sironen, Jorma Toppari, Noora Kotaja

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. P-body-like condensates in the germline.Seminars in cell & developmental biology · 2024
    Review
  3. Article
  4. Article
  5. Autophagy: A Double-Edged Sword in Male Reproduction.International journal of molecular sciences · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Germ Cell Responses to Stress: The Role of RNP Granules.Frontiers in cell and developmental biology · 2019
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Matteo Da Rosa Institute of Biomedicine, Department of Physiology , University of Turku , Turku , Finland.
Tiina Lehtiniemia Institute of Biomedicine, Department of Physiology , University of Turku , Turku , Finland.
Opeyemi Olotua Institute of Biomedicine, Department of Physiology , University of Turku , Turku , Finland.
Daniel Fischerc Natural Resources Institute Finland (Luke), Green Technology , Jokioinen , Finland.
Fu-Ping Zhanga Institute of Biomedicine, Department of Physiology , University of Turku , Turku , Finland.
Helena Vihinene Electron Microscopy Unit, Institute of Biotechnology, University of Helsinki , Helsinki , Finland.
Eija Jokitaloe Electron Microscopy Unit, Institute of Biotechnology, University of Helsinki , Helsinki , Finland.
Anu Sironenc Natural Resources Institute Finland (Luke), Green Technology , Jokioinen , Finland.
Jorma Topparia Institute of Biomedicine, Department of Physiology , University of Turku , Turku , Finland.
Noora Kotajaa Institute of Biomedicine, Department of Physiology , University of Turku , Turku , Finland.
University of Turku · FINatural Resources Institute Finland · FIUniversity of Helsinki · FITurku University Hospital · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribonucleoprotein (RNP) granules play a major role in compartmentalizing cytoplasmic RNA regulation. Haploid round spermatids that have exceptionally diverse transcriptomes are characterized by a unique germ cell-specific RNP granule, the chromatoid body (CB). The CB shares many characteristics with somatic RNP granules but also has germline-specific features. The CB appears to be a central structure in PIWI-interacting RNA (piRNA)-targeted RNA regulation. Here, we identified a novel CB component, FYCO1, which is involved in the intracellular transport of autophagic vesicles in somatic cells. We demonstrated that the CB is associated with autophagic activity. Induction of autophagy leads to the recruitment of lysosomal vesicles onto the CB in a FYCO1-dependent manner as demonstrated by the analysis of a germ cell-specific Fyco1 conditional knockout mouse model. Furthermore, in the absence of FYCO1, the integrity of the CB was affected and the CB was fragmented. Our results suggest that RNP granule homeostasis is regulated by FYCO1-mediated autophagy.

Indexed as

AutophagyHaploidyAnimalsArgonaute ProteinsAutophagosomesCytoplasmic GranulesCytoskeletal ProteinsDNA-Binding ProteinsGene Expression ProfilingGene Expression RegulationGene OntologyLysosomesMaleMice, KnockoutMicrotubulesNerve Tissue ProteinsArgonaute ProteinsCytoskeletal ProteinsDNA-Binding ProteinsNerve Tissue ProteinsPhosphatidylinositol 3-KinasesPhosphoinositide-3 Kinase InhibitorsPiwil2 protein, mouseRibonucleoproteinsRufy3 protein, mouseautophagychromatoid bodyFYCO1germ cellknockoutlysosomeposttranscriptionalRNP granulespermatogenesisvesicle

Identifiers

PMID27929729
PMCPMC5324852
OpenAlexW2560410271

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.