Evidence map›Paper›PMID 27927200›Full record

ArticleBMC biology2016

Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway.

Deborah L McEwan, Rhonda L Feinbaum, Nicholas Stroustrup, Wilhelm Haas, Annie L Conery, Anthony Anselmo, Ruslan Sadreyev, Frederick M Ausubel

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  5. Genome-wide characterization of theFrontiers in plant science · 2026
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  7. Kinome-wide RNAi screening inJournal of biosciences · 2025
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  8. Unzipping the defense: a comprehensive review on bZIP transcription factors inFrontiers in cellular and infection microbiology · 2025
    Review
  9. Article
  10. An intraflagellar transport dependent negative feedback regulates the MAPKKK DLK-1 to protect cilia from degeneration.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. A PAX6-regulated receptor tyrosine kinase pairs with a pseudokinase to activate immune defense upon oomycete recognition inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. MultiplebioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Deborah L McEwanDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Rhonda L FeinbaumDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Nicholas StroustrupDepartment of Systems Biology, Harvard Medical School, Boston, MA, USA.
Wilhelm HaasCenter for Cancer Research, Massachusetts General Hospital, Boston, MA, USA.
Annie L ConeryDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Anthony AnselmoDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Ruslan SadreyevDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Frederick M AusubelDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA. ausubel@molbio.mgh.harvard.edu.
Harvard University · USMassachusetts General Hospital · USCenter for Cancer Research · USCenter for Systems Biology · US

Funding

ROLE OF DIETARY CONSTITUENTS ON GENE EXPRESSION IN INTESTINAL EPITHELIUMP30DK040561 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MARTIN TORRIANI · 1994 to 2026
$31.6M
Identifying novel anti-infectives by high through-put screening in whole animalsR01AI085581 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI AUSUBEL, FREDERICK M · 2009 to 2013
$4.7M
C. elegans immune defense against the P. aeruginosa toxin Exotoxin AF32AI098307 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI MCEWAN, DEBORAH LYN · 2013 to 2015
$165k
NIAID NIH HHS F32 AI098307NIAID NIH HHS R01 AI085581NIDDK NIH HHS P30 DK040561
6 · The paper itself

Abstract

backgroundMany pathogens secrete toxins that target key host processes resulting in the activation of immune pathways. The secreted Pseudomonas aeruginosa toxin Exotoxin A (ToxA) disrupts intestinal protein synthesis, which triggers the induction of a subset of P. aeruginosa-response genes in the nematode Caenorhabditis elegans.

resultsWe show here that one ToxA-induced C. elegans gene, the Tribbles pseudokinase ortholog nipi-3, is essential for host survival following exposure to P. aeruginosa or ToxA. We find that NIPI-3 mediates the post-developmental expression of intestinal immune genes and proteins and primarily functions in parallel to known immune pathways, including p38 MAPK signaling. Through mutagenesis screening, we identify mutants of the bZIP C/EBP transcription factor cebp-1 that suppress the hypersusceptibility defects of nipi-3 mutants.

conclusionsNIPI-3 is a negative regulator of CEBP-1, which in turn negatively regulates protective immune mechanisms. This pathway represents a previously unknown innate immune signaling pathway in intestinal epithelial cells that is involved in the surveillance of cellular homeostasis. Because NIPI-3 and CEBP-1 are also essential for C. elegans development, NIPI-3 is analogous to other key innate immune signaling molecules such as the Toll receptors in Drosophila that have an independent role during development.

Indexed as

Immunity, InnateADP Ribose TransferasesAnimalsBacterial ToxinsBasic-Leucine Zipper Transcription FactorsCaenorhabditis elegansCaenorhabditis elegans ProteinsCCAAT-Enhancer-Binding ProteinsExotoxinsGastrointestinal MicrobiomeGene Expression RegulationIntestinal MucosaIntestinesp38 Mitogen-Activated Protein KinasesProtein BiosynthesisProtein KinasesADP Ribose TransferasesBacterial ToxinsBasic-Leucine Zipper Transcription FactorsCaenorhabditis elegans ProteinsCCAAT-Enhancer-Binding ProteinsCebp-1 protein, C elegansExotoxinsNIPI-3 protein, C elegansp38 Mitogen-Activated Protein KinasesProtein KinasesPseudomonas aeruginosa Exotoxin AVirulence FactorsCaenorhabditis elegansC/EBPExotoxin AInnate epithelial immunityLifespan machinePseudomonas aeruginosaSurveillance immunityTranslational inhibitionTribbles-like kinase

Identifiers

PMID27927200
PMCPMC5143455
OpenAlexW2560511161

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.