Evidence map›Paper›PMID 27918591›Full record

ArticlePloS one2016

Transcriptomic Analysis of Mouse Cochlear Supporting Cell Maturation Reveals Large-Scale Changes in Notch Responsiveness Prior to the Onset of Hearing.

Juan C Maass, Rende Gu, Tiantian Cai, Ying-Wooi Wan, Silvia C Cantellano, Joanna S T Asprer, Hongyuan Zhang, Hsin-I Jen, Renée K Edlund, Zhandong Liu and 1 more

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. AAV-Sparcl1 promotes hair cell regeneration by increasing supporting cell plasticity.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  4. Article
  5. Reprogramming withPNAS nexus · 2024
    Article
  6. The Impact of Post-Birth Timing on OAE Test Efficacy: An Observational Analysis of Neonatal Hearing Screening.Indian journal of otolaryngology and head and neck surgery : official publication of the Association of Otolaryngologists of India · 2024
    Article
  7. Comparison of MicroRNA Levels of 18-60-month-old Autistic Children with Those of Their Siblings and Controls.Clinical psychopharmacology and neuroscience : the official scientific journal of the Korean College of Neuropsychopharmacology · 2024
    Article
  8. Expression ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. The Genomics of Auditory Function and Disease.Annual review of genomics and human genetics · 2022
    Review
  14. Review
  15. Article
  16. Article
  17. The Notch Ligand Jagged1 Is Required for the Formation, Maintenance, and Survival of Hensen's Cells in the Mouse Cochlea.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  18. Review
  19. Review
  20. LIN28B/Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Juan C MaassDepartment of Otolaryngology, Hospital Clínico Universidad de Chile and Interdisciplinary Program of Physiology and Biophysics ICBM Universidad de Chile, Santiago, Chile.
Rende GuDepartment of Neuroscience, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Tiantian CaiDepartment of Neuroscience, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Ying-Wooi WanDepartment of Pediatrics, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Silvia C CantellanoDepartment of Otolaryngology, Hospital Clínico Universidad de Chile and Interdisciplinary Program of Physiology and Biophysics ICBM Universidad de Chile, Santiago, Chile.
Joanna S T AsprerDepartment of Neuroscience, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Hongyuan ZhangDepartment of Neuroscience, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Hsin-I JenProgram in Developmental Biology, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Renée K EdlundDepartment of Neuroscience, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Zhandong LiuDepartment of Pediatrics, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.
Andrew K GrovesDepartment of Neuroscience, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX, United States of America.

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TOLIAS, KIMBERLY R · 1988 to 2013
$29.4M
Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BUTEL, JANET S · 1994 to 2015
$21.7M
Enhancing Atoh1 function in hair cell regenerationR01DC014832 · NIDCD · WASHINGTON UNIVERSITY · PI Gabriel Corfas, Andrew K Groves · 2016 to 2026
$6.7M
Genetic Regulation of Cochlear DevelopmentR01DC006185 · NIDCD · HOUSE RESEARCH INSTITUTE · PI GROVES, ANDREW K · 2003 to 2014
$3.6M
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
Identifying the Atoh1 targetome in hair cells with deep sequencingR21DC011657 · NIDCD · BAYLOR COLLEGE OF MEDICINE · PI GROVES, ANDREW K · 2012 to 2013
$421k
NCI NIH HHS P30 CA125123NCRR NIH HHS S10 RR024574NIAID NIH HHS P30 AI036211NICHD NIH HHS P30 HD024064NIDCD NIH HHS R01 DC006185NIDCD NIH HHS R01 DC014832NIDCD NIH HHS R21 DC011657
6 · The paper itself

Abstract

Neonatal mouse cochlear supporting cells have a limited ability to divide and trans-differentiate into hair cells, but this ability declines rapidly in the two weeks after birth. This decline is concomitant with the morphological and functional maturation of the organ of Corti prior to the onset of hearing. However, despite this association between maturation and loss of regenerative potential, little is known of the molecular changes that underlie these events. To identify these changes, we used RNA-seq to generate transcriptional profiles of purified cochlear supporting cells from 1- and 6-day-old mice. We found many significant changes in gene expression during this period, many of which were related to regulation of proliferation, differentiation of inner ear components and the maturation of the organ of Corti prior to the onset of hearing. One example of a change in regenerative potential of supporting cells is their robust production of hair cells in response to a blockade of the Notch signaling pathway at the time of birth, but a complete lack of response to such blockade just a few days later. By comparing our supporting cell transcriptomes to those of supporting cells cultured in the presence of Notch pathway inhibitors, we show that the transcriptional response to Notch blockade disappears almost completely in the first postnatal week. Our results offer some of the first molecular insights into the failure of hair cell regeneration in the mammalian cochlea.

Indexed as

AnimalsCell DifferentiationCell ProliferationCochleaEar, InnerGene ExpressionGene Expression ProfilingHair Cells, AuditoryHearingMiceMice, Inbred ICROrgan of CortiReceptors, NotchRegenerationSignal TransductionTranscription, GeneticReceptors, Notch

Identifiers

PMID27918591
PMCPMC5137903

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.