Evidence map›Paper›PMID 27917187›Full record

ArticleFrontiers in plant science2016

Integrating Physiology and Architecture in Models of Fruit Expansion.

Mikolaj Cieslak, Ibrahim Cheddadi, Frédéric Boudon, Valentina Baldazzi, Michel Génard, Christophe Godin, Nadia Bertin

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Computational Models of Auxin-Driven Patterning in Shoots.Cold Spring Harbor perspectives in biology · 2022
    Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Mikolaj CieslakINRIA/CIRAD/INRA Project-team Virtual Plants, UMR AGAPMontpellier, France; INRA PSH, Domaine Saint PaulAvignon, France.
Ibrahim CheddadiINRIA/CIRAD/INRA Project-team Virtual Plants, UMR AGAPMontpellier, France; INRA PSH, Domaine Saint PaulAvignon, France.
Frédéric BoudonINRIA/CIRAD/INRA Project-team Virtual Plants, UMR AGAP Montpellier, France.
Valentina BaldazziINRA PSH, Domaine Saint Paul Avignon, France.
Michel GénardINRA PSH, Domaine Saint Paul Avignon, France.
Christophe GodinINRIA/CIRAD/INRA Project-team Virtual Plants, UMR AGAP Montpellier, France.
Nadia BertinINRA PSH, Domaine Saint Paul Avignon, France.
Institut national de recherche en informatique et en automatique · FRPlantes et Système de Cultures Horticoles · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRGenetic Improvement and Adaptation of Mediterranean and Tropical Plants · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Architectural properties of a fruit, such as its shape, vascular patterns, and skin morphology, play a significant role in determining the distributions of water, carbohydrates, and nutrients inside the fruit. Understanding the impact of these properties on fruit quality is difficult because they develop over time and are highly dependent on both genetic and environmental controls. We present a 3D functional-structural fruit model that can be used to investigate effects of the principle architectural properties on fruit quality. We use a three step modeling pipeline in the OpenAlea platform: (1) creating a 3D volumetric mesh representation of the internal and external fruit structure, (2) generating a complex network of vasculature that is embedded within this mesh, and (3) integrating aspects of the fruit's function, such as water and dry matter transport, with the fruit's structure. We restrict our approach to the phase where fruit growth is mostly due to cell expansion and the fruit has already differentiated into different tissue types. We show how fruit shape affects vascular patterns and, as a consequence, the distribution of sugar/water in tomato fruit. Furthermore, we show that strong interaction between tomato fruit shape and vessel density induces, independently of size, an important and contrasted gradient of water supply from the pedicel to the blossom end of the fruit. We also demonstrate how skin morphology related to microcracking distribution affects the distribution of water and sugars inside nectarine fruit. Our results show that such a generic model permits detailed studies of various, unexplored architectural features affecting fruit quality development.

Indexed as

fruit shapefunctional-structural plant modelingvascular patternsvirtual fruitwater and dry matter transport

Identifiers

PMID27917187
PMCPMC5116533
OpenAlexW2551206351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.