Evidence map›Paper›PMID 27917166›Full record

ArticleFrontiers in microbiology2016

Temporal Metagenomic and Metabolomic Characterization of Fresh Perennial Ryegrass Degradation by Rumen Bacteria.

Olga L Mayorga, Alison H Kingston-Smith, Eun J Kim, Gordon G Allison, Toby J Wilkinson, Matthew J Hegarty, Michael K Theodorou, Charles J Newbold, Sharon A Huws

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 52 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Olga L MayorgaInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Alison H Kingston-SmithInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Eun J KimDepartment of Animal Science, Kyungpook National University Sangju, Korea.
Gordon G AllisonInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Toby J WilkinsonInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Matthew J HegartyInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Michael K TheodorouDepartment of Animal Production, Welfare and Veterinary Sciences, Harper Adams University Newport, UK.
Charles J NewboldInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Sharon A HuwsInstitute of Biological, Environmental and Rural Sciences, Aberystwyth University Aberystwyth, UK.
Institute of Biological, Environmental and Rural Sciences · GBAberystwyth University · GBHarper Adams University · GBKyungpook National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the relationship between ingested plant material and the attached microbiome is essential for developing methodologies to improve ruminant nutrient use efficiency. We have previously shown that perennial ryegrass (PRG) rumen bacterial colonization events follow a primary (up to 4 h) and secondary (after 4 h) pattern based on the differences in diversity of the attached bacteria. In this study, we investigated temporal niche specialization of primary and secondary populations of attached rumen microbiota using metagenomic shotgun sequencing as well as monitoring changes in the plant chemistry using mid-infrared spectroscopy (FT-IR). Metagenomic Rapid Annotation using Subsystem Technology (MG-RAST) taxonomical analysis of shotgun metagenomic sequences showed that the genera

Indexed as

bacteriacolonizationmetagenomicsmicrobiomeperennial ryegrassplant degradationrumen

Identifiers

PMID27917166
PMCPMC5114307
OpenAlexW2553292880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.