Evidence map›Paper›PMID 27915454›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017

Round fruit shape in WI7239 cucumber is controlled by two interacting quantitative trait loci with one putatively encoding a tomato SUN homolog.

Yupeng Pan, Xinjing Liang, Meiling Gao, Hanqiang Liu, Huanwen Meng, Yiqun Weng, Zhihui Cheng

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

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66citing papers in PubMed
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66 citing papers in PubMed.

  1. Horticulture research · 2026
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  17. Genetic mapping reveals a candidate geneFrontiers in plant science · 2024
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6 more citing papers are in PubMed but not listed here.

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5 · Who and what money

Authors and funding

7 authors.

Yupeng PanHorticulture College, Northwest A&F University, Yangling, 712100, China.
Xinjing LiangHorticulture College, Northwest A&F University, Yangling, 712100, China.
Meiling GaoHorticulture Department, University of Wisconsin, Madison, WI, 53706, USA.
Hanqiang LiuHorticulture College, Northwest A&F University, Yangling, 712100, China.
Huanwen MengHorticulture College, Northwest A&F University, Yangling, 712100, China.
Yiqun WengHorticulture Department, University of Wisconsin, Madison, WI, 53706, USA. yiqun.weng@wisc.edu.ORCID http://orcid.org/0000-0001-9457-2234
Zhihui ChengHorticulture College, Northwest A&F University, Yangling, 712100, China. chengzh@nwsuaf.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageQTL analysis revealed two interacting loci, FS1.2 and FS2.1, underlying round fruit shape in WI7239 cucumber; CsSUN , a homolog of tomato fruit shape gene SUN , was a candidate for FS1.2. Fruit size is an important quality and yield trait in cucumber, but its genetic basis remains poorly understood. Here we reported QTL mapping results on fruit size with segregating populations derived from the cross between WI7238 (long fruit) and WI7239 (round fruit) inbred cucumber lines. Phenotypic data of fruit length and diameter were collected at anthesis, immature and mature fruit stages in four environments. Ten major-effect QTL were detected for six traits; synthesis of information from these QTL supported two genes, FS1.2 and FS2.1, underlying fruit size variation in the examined populations. Under the two-gene model, deviation from expected segregation ratio in fruit length and diameter among segregating populations was observed, which could be explained mainly by the interactions between FS1.2 and FS2.1, and segregation distortion in the FS2.1 region. Genome-wide candidate gene search identified CsSUN, a homolog of the tomato fruit shape gene SUN, as the candidate for FS1.2. The round-fruited WI7239 had a 161-bp deletion in the first exon of CsSUN, and its expression in WI7239 was significantly lower than that in WI7238. A marker derived from this deletion was mapped at the peak location of FS1.2 in QTL analysis. Comparative analysis suggested the melon gene CmSUN-14, a homolog of CsSUN as a candidate of the fl2/fd2/fw2 QTL in melon. This study revealed the unique genetic architecture of round fruit shape in WI7239 cucumber. It also highlights the power of QTL analysis for traits with a simple genetic basis but their expression is complicated by other factors.

Indexed as

Quantitative Trait LociBase SequenceChromosome MappingCrosses, GeneticCucumis sativusFruitGenes, PlantGenetic LinkageGenetic MarkersINDEL MutationMicrosatellite RepeatsPhenotypeGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.