Evidence map›Paper›PMID 27913979›Full record

ArticleVirus genes2017

Genetic diversity of the genotype VII Newcastle disease virus: identification of a novel VIIj sub-genotype.

Cong Xue, Yanlong Cong, Renfu Yin, Yixue Sun, Chan Ding, Shengqing Yu, Xiufan Liu, Shunlin Hu, Jing Qian, Qianliang Yuan and 3 more

Abstract read
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In one paragraph

Article in Virus genes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

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  10. Updated unified phylogenetic classification system and revised nomenclature for Newcastle disease virus.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Cong XueLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Yanlong CongLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Renfu YinLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Yixue SunCollege of Animal Science and Technology, Jilin Agricultural University, Changchun, 130118, China.
Chan DingShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, 200241, China.
Shengqing YuShanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Shanghai, 200241, China.
Xiufan LiuAnimal Infectious Disease Laboratory, College of Veterinary Medicine, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Shunlin HuAnimal Infectious Disease Laboratory, College of Veterinary Medicine, Yangzhou University, Yangzhou, 225009, Jiangsu, China.
Jing QianLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Qianliang YuanLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Mingxi YangLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.
Chunfeng WangCollege of Animal Science and Technology, Jilin Agricultural University, Changchun, 130118, China. wangchunfeng@jlau.edu.cn.
Zhuang DingLaboratory of Infectious Diseases, College of Veterinary Medicine, Jilin University, Changchun, 130062, China. dingzhuang@jlu.edu.cn.
Jilin University · CNJilin Agricultural University · CNYangzhou University · CNChinese Academy of Agricultural Sciences · CNShanghai Veterinary Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Newcastle disease (ND) is a highly contagious disease of poultry caused by Newcastle disease virus (NDV). Multiple genotypes of NDV have been circulating worldwide and NDV is continuously evolving, resulting into more diversity. Of multiple viral genotypes, VII is particularly important given that it had been associated with most recent ND outbreaks worldwide. In this study, an epidemiological investigation performed in northeastern China during 2014-2015 showed that 11 genotype VII isolates amounted to 55 percent in a total number of NDV isolates. Therefore, to evaluate the genetic diversity worldwide and epidemiological distribution in China of genotype VII NDV, a phylogenetic analysis based on the 1255 complete F gene sequences showed that VII is the most predominant genotype worldwide. A further detailed characterization on genotype VII was conducted based on the 477 complete F gene sequences from 11 isolates and 466 reference viruses available in GenBank. The results demonstrated that VII can be further divided into 8 sub-genotypes (VIIb, VIId-VIIj), indicating its complex genetic diversity. It is worthy of note that the isolation rate of VIIj is increasing recently. It emphasizes the necessity to pay close attention to the epidemiological dynamic of genotype VII NDV and highlights the importance of vaccination program.

Indexed as

Genetic VariationGenotypeAnimalsChinaEvolution, MolecularNewcastle DiseaseNewcastle disease virusPhylogenyPhylogeographyPoultryRNA, ViralSequence Analysis, DNARNA, ViralDiversityGenotypingNewcastle disease virusVIIj

Identifiers

PMID27913979
OpenAlexW2557795252

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.