Evidence map›Paper›PMID 27911813›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Spatiotemporal imaging of small GTPases activity in live cells.

Stephanie Voss, Dennis M Krüger, Oliver Koch, Yao-Wen Wu

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Multiplexed imaging for probing RAS-RAF interactions in living cells.Biochimica et biophysica acta. Biomembranes · 2023
    Article
  3. Article
  4. Frontiers in cell and developmental biology · 2021
    Review
  5. Nucleic-Acid Structures as Intracellular Probes for Live Cells.Advanced materials (Deerfield Beach, Fla.) · 2020
    Review
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Stephanie VossChemical Genomics Centre, Max Planck Society, 44227 Dortmund, Germany.
Dennis M KrügerChemical Genomics Centre, Max Planck Society, 44227 Dortmund, Germany.
Oliver KochFaculty of Chemistry and Chemical Biology, TU Dortmund University, 44227 Dortmund, Germany.
Yao-Wen WuChemical Genomics Centre, Max Planck Society, 44227 Dortmund, Germany; yaowen.wu@mpi-dortmund.mpg.de.ORCID 0000-0002-2573-8736
Max Planck Society · DETU Dortmund University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ras-like small GTPases function as molecular switches and regulate diverse cellular events. To examine the dynamics of signaling requires spatiotemporal visualization of their activity in the cell. Current small GTPase sensors rely on specific effector domains that are available for only a small number of GTPases and compete for endogenous regulator/effector binding. Here, we describe versatile conformational sensors for GTPase activity (COSGAs) based on the conserved GTPase fold. Conformational changes upon GDP/GTP exchange were directly observed in solution, on beads, and in live cells by Förster resonance energy transfer (FRET). The COSGAs allow for monitoring of Rab1 and K-Ras activity in live cells using fluorescence lifetime imaging microscopy. We found that Rab1 is largely active in the cytoplasm and inactive at the Golgi, suggesting that the Golgi serves as the terminal of the Rab1 functional cycle. K-Ras displays polarized activity at the plasma membrane, with less activity at the edge of the cell and membrane ruffles.

Indexed as

AnimalsCell MembraneChlorocebus aethiopsCOS CellsDogsFluorescence PolarizationFluorescence Resonance Energy TransferFluorescent DyesGuanosine DiphosphateGuanosine TriphosphateHeLa CellsHumansMadin Darby Canine Kidney CellsMicroscopy, FluorescenceModels, MolecularMonomeric GTP-Binding ProteinsFluorescent DyesGuanosine DiphosphateGuanosine TriphosphateMonomeric GTP-Binding Proteinsrab1 GTP-Binding Proteinsras ProteinsFLIM/FRETmembrane traffickingprotein chemical modificationsignal transductionsmall GTPases

Identifiers

PMID27911813
PMCPMC5167155
OpenAlexW2559177716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.