Evidence map›Paper›PMID 27911046›Full record

ArticleMolecular plant pathology2017

Verticillium dahliae LysM effectors differentially contribute to virulence on plant hosts.

Anja Kombrink, Hanna Rovenich, Xiaoqian Shi-Kunne, Eduardo Rojas-Padilla, Grardy C M van den Berg, Emmanouil Domazakis, Ronnie de Jonge, Dirk-Jan Valkenburg, Andrea Sánchez-Vallet, Michael F Seidl and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular plant pathology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
21.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Journal of agricultural and food chemistry · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Whole-Genome Sequencing and Genome Annotation of PathogenicJournal of fungi (Basel, Switzerland) · 2024
    Article
  15. Characterization of the CBM50 Gene Family inJournal of fungi (Basel, Switzerland) · 2024
    Article
  16. Article
  17. Genomic insights intoFrontiers in microbiology · 2024
    Review
  18. Frontiers in microbiology · 2024
    Article
  19. Article
  20. Review

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Anja KombrinkLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Hanna RovenichLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Xiaoqian Shi-KunneLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Eduardo Rojas-PadillaLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Grardy C M van den BergLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Emmanouil DomazakisLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Ronnie de JongeLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Dirk-Jan ValkenburgLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Andrea Sánchez-ValletLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Michael F SeidlLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Bart P H J ThommaLaboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, Wageningen, PB 6708, the Netherlands.
Wageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chitin-binding lysin motif (LysM) effectors contribute to the virulence of various plant-pathogenic fungi that are causal agents of foliar diseases. Here, we report the LysM effectors of the soil-borne fungal vascular wilt pathogen Verticillium dahliae. Comparative genomics revealed three core LysM effectors that are conserved in a collection of V. dahliae strains. Remarkably, and in contrast with the previously studied LysM effectors of other plant pathogens, no expression of core LysM effectors was monitored in planta in a taxonomically diverse panel of host plants. Moreover, targeted deletion of the individual LysM effector genes in V. dahliae strain JR2 did not compromise virulence in infections on Arabidopsis, tomato or Nicotiana benthamiana. Interestingly, an additional lineage-specific LysM effector is encoded in the genome of V. dahliae strain VdLs17, but not in any other V. dahliae strain sequenced to date. Remarkably, this lineage-specific effector is expressed in planta and contributes to the virulence of V. dahliae strain VdLs17 on tomato, but not on Arabidopsis or N. benthamiana. Functional analysis revealed that this LysM effector binds chitin, is able to suppress chitin-induced immune responses and protects fungal hyphae against hydrolysis by plant hydrolytic enzymes. Thus, in contrast with the core LysM effectors of V. dahliae, this lineage-specific LysM effector of strain VdLs17 contributes to virulence in planta.

Indexed as

Host-Pathogen InteractionsAmino Acid SequenceArabidopsisChitinFungal ProteinsGenes, FungalGenome, FungalHydrolysisHyphaeNicotianaPhylogenyPlant ImmunityPolymorphism, GeneticProtein BindingProtein DomainsSequence Analysis, DNAChitinFungal Proteinsaggressivenesschitincomparative genomicshyphal protectionlineage-specific effectortomatovascular wilt disease

Identifiers

PMID27911046
PMCPMC6638240
OpenAlexW2558786558

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.