Evidence map›Paper›PMID 27910892›Full record

ArticleScientific reports2016

Dynamic Microenvironment Induces Phenotypic Plasticity of Esophageal Cancer Cells Under Flow.

Gizem Calibasi Kocal, Sinan Güven, Kira Foygel, Aaron Goldman, Pu Chen, Shiladitya Sengupta, Ramasamy Paulmurugan, Yasemin Baskin, Utkan Demirci

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Macrophage Polarization Profiling in Dynamic Culture System.Cellular and molecular bioengineering · 2025
    Article
  4. Pleura and peritoneum · 2024
    Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Manipulation and Mechanical Deformation of Leukemia Cells by High-Frequency Ultrasound Single Beam.IEEE transactions on ultrasonics, ferroelectrics, and frequency control · 2022
    Article
  12. Article
  13. A Perfusion Model to Evaluate Response to Photodynamic Therapy in 3D Tumors.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Review
  20. Integrin Antibody Decreases Deformability of Patient-Derived Pre-B Acute Lymphocytic Leukemia Cells as Measured by High-Frequency Acoustic Tweezers.Journal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Gizem Calibasi KocalBio-Acoustic MEMS in Medicine Laboratory, Canary Center at Stanford for Early Cancer Detection, Department of Radiology, Department of Electrical Engineering (by courtesy), Stanford School of Medicine, Palo Alto, California, 94304, USA.
Sinan GüvenBio-Acoustic MEMS in Medicine Laboratory, Canary Center at Stanford for Early Cancer Detection, Department of Radiology, Department of Electrical Engineering (by courtesy), Stanford School of Medicine, Palo Alto, California, 94304, USA.
Kira FoygelDepartment of Radiology, Molecular Imaging Program at Stanford, Bio-X Program, Stanford University School of Medicine, Palo Alto, California, 94304, USA.
Aaron GoldmanDepartment of Medicine, Harvard Medical School, Boston, Massachusetts, 02115, USA.
Pu ChenBio-Acoustic MEMS in Medicine Laboratory, Canary Center at Stanford for Early Cancer Detection, Department of Radiology, Department of Electrical Engineering (by courtesy), Stanford School of Medicine, Palo Alto, California, 94304, USA.
Shiladitya SenguptaDepartment of Medicine, Harvard Medical School, Boston, Massachusetts, 02115, USA.
Ramasamy PaulmuruganDepartment of Radiology, Molecular Imaging Program at Stanford, Bio-X Program, Stanford University School of Medicine, Palo Alto, California, 94304, USA.
Yasemin BaskinDepartment of Basic Oncology, Institute of Oncology, Dokuz Eylul University, Izmir, 35340, Turkey.
Utkan DemirciBio-Acoustic MEMS in Medicine Laboratory, Canary Center at Stanford for Early Cancer Detection, Department of Radiology, Department of Electrical Engineering (by courtesy), Stanford School of Medicine, Palo Alto, California, 94304, USA.

Funding

Nano Characterization and Nano Fabrication CoreU54CA199075 · NCI · STANFORD UNIVERSITY · PI GAMBHIR, SANJIV S · 2015 to 2019
$9.6M
VECTOR COREP30NS069375 · NINDS · STANFORD UNIVERSITY · PI STEINBERG, GARY K · 2011 to 2019
$6.3M
Platform technology for detection of cancer-associated viruses in HIV patientsR01DE024971 · NIDCR · STANFORD UNIVERSITY · PI DEMIRCI, UTKAN, KAYE, KENNETH M · 2015 to 2019
$2.1M
Minimizing the role of cryoprotectant toxicity for cryopreservationR01EB015776 · NIBIB · STANFORD UNIVERSITY · PI DEMIRCI, UTKAN · 2012 to 2015
$1.5M
Magnetic Cellular Assembly and Microfluidic Conditioning for Generation of FunctiR15HL115556 · NHLBI · UNIVERSITY OF LOUISVILLE · PI GIRIDHARAN, GURUPRASAD A · 2013 to 2013
$476k
NCI NIH HHS U54 CA199075NHLBI NIH HHS R15 HL115556NIBIB NIH HHS R01 EB015776NIDCR NIH HHS R01 DE024971NINDS NIH HHS P30 NS069375
6 · The paper itself

Abstract

Cancer microenvironment is a remarkably heterogeneous composition of cellular and non-cellular components, regulated by both external and intrinsic physical and chemical stimuli. Physical alterations driven by increased proliferation of neoplastic cells and angiogenesis in the cancer microenvironment result in the exposure of the cancer cells to elevated levels of flow-based shear stress. We developed a dynamic microfluidic cell culture platform utilizing eshopagael cancer cells as model cells to investigate the phenotypic changes of cancer cells upon exposure to fluid shear stress. We report the epithelial to hybrid epithelial/mesenchymal transition as a result of decreasing E-Cadherin and increasing N-Cadherin and vimentin expressions, higher clonogenicity and ALDH positive expression of cancer cells cultured in a dynamic microfluidic chip under laminar flow compared to the static culture condition. We also sought regulation of chemotherapeutics in cancer microenvironment towards phenotypic control of cancer cells. Such in vitro microfluidic system could potentially be used to monitor how the interstitial fluid dynamics affect cancer microenvironment and plasticity on a simple, highly controllable and inexpensive bioengineered platform.

Indexed as

Epithelial-Mesenchymal TransitionShear StrengthStress, MechanicalTumor MicroenvironmentCell Line, TumorEsophageal NeoplasmsHumansNeoplasm ProteinsNeoplasm Proteins

Identifiers

PMID27910892
PMCPMC5133540

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.