Evidence map›Paper›PMID 27907910›Full record

ArticleOncotarget2017

A mononucleotide repeat in PRRT2 is an important, frequent target of mismatch repair deficiency in cancer.

Inês Teles Alves, David Cano, René Böttcher, Hetty van der Korput, Winand Dinjens, Guido Jenster, Jan Trapman

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Inês Teles AlvesDepartment of Urology, Erasmus MC, Rotterdam, The Netherlands.
David CanoDepartment of Pathology, Erasmus MC, Rotterdam, The Netherlands.
René BöttcherDepartment of Urology, Erasmus MC, Rotterdam, The Netherlands.
Hetty van der KorputDepartment of Pathology, Erasmus MC, Rotterdam, The Netherlands.
Winand DinjensDepartment of Pathology, Erasmus MC, Rotterdam, The Netherlands.
Guido JensterDepartment of Urology, Erasmus MC, Rotterdam, The Netherlands.
Jan TrapmanDepartment of Pathology, Erasmus MC, Rotterdam, The Netherlands.
Erasmus University Rotterdam · NLErasmus MC · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The DNA mismatch repair (MMR) system corrects DNA replication mismatches thereby contributing to the maintenance of genomic stability. MMR deficiency has been observed in prostate cancer but its impact on the genomic landscape of these tumours is not known. In order to identify MMR associated mutations in prostate cancer we have performed whole genome sequencing of the MMR deficient PC346C prostate cancer cell line. We detected a total of 1196 mutations in PC346C which was 1.5-fold higher compared to a MMR proficient prostate cancer sample (G089). Of all different mutation classes, frameshifts in mononucleotide repeat (MNR) sequences were significantly enriched in the PC346C sample. As a result, a selection of genes with frameshift mutations in MNR was further assessed regarding its mutational status in a comprehensive panel of prostate, ovarian, endometrial and colorectal cancer cell lines. We identified PRRT2 and DAB2IP to be frequently mutated in MMR deficient cell lines, colorectal and endometrial cancer patient samples. Further characterization of PRRT2 revealed an important role of this gene in cancer biology. Both normal prostate cell lines and a colorectal cancer cell line showed increased proliferation, migration and invasion when expressing the mutated form of PRRT2 (ΔPRRT2). The wild-type PRRT2 (PRRT2wt) had an inhibitory effect in proliferation, consistent with the low expression level of PRRT2 in cancer versus normal prostate samples.

Indexed as

Microsatellite InstabilityCell Line, TumorCell MovementCell ProliferationColorectal NeoplasmsDNA Mismatch RepairEndometrial NeoplasmsFemaleFrameshift MutationHumansMaleMembrane ProteinsMicrosatellite RepeatsNeoplasmsNerve Tissue ProteinsOvarian NeoplasmsDAB2IP protein, humanMembrane ProteinsNerve Tissue ProteinsPRRT2 protein, humanras GTPase-Activating Proteinscolorectal cancermismatch repairmononucleotide repeatprostate cancerPRRT2

Identifiers

PMID27907910
PMCPMC5351611
OpenAlexW2553025329

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.