Evidence map›Paper›PMID 27902701›Full record

ArticlePLoS genetics2016

Heads, Shoulders, Elbows, Knees, and Toes: Modular Gdf5 Enhancers Control Different Joints in the Vertebrate Skeleton.

Hao Chen, Terence D Capellini, Michael Schoor, Doug P Mortlock, A Hari Reddi, David M Kingsley

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 2 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 2 syntheses or guidelines pooled it, 77 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
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  7. Creb5 controls its own expression and directly induces the joint interzone regulatory program.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  15. Cis-regulatory control of mammalian Trps1 gene expression.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 2 countries.

Hao ChenDepartment of Developmental Biology, Beckman Center B300, Stanford University School of Medicine, Stanford, California, United States of America.
Terence D CapelliniDepartment of Developmental Biology, Beckman Center B300, Stanford University School of Medicine, Stanford, California, United States of America.
Michael SchoorMiltenyi Biotec GmbH, Bergisch Gladbach, Germany.
Doug P MortlockMolecular Physiology and Biophysics and Vanderbilt Genetics Institute, Vanderbilt University, Nashville, Tennessee, United States of America.
A Hari ReddiCenter for Tissue Regeneration and Repair, University of California Davis Medical Center, Sacramento, California, United States of America.
David M KingsleyDepartment of Developmental Biology, Beckman Center B300, Stanford University School of Medicine, Stanford, California, United States of America.
Broad Institute · USHoward Hughes Medical Institute · USMiltenyi Biotec (Germany) · DEStanford University · USUniversity of California Davis Medical Center · USVanderbilt University · US

Funding

Genetic Analysis of Bone Morphogenic ProteinsR37AR042236 · NIAMS · STANFORD UNIVERSITY · PI KINGSLEY, DAVID M · 2002 to 2011
$3.4M
GENETIC ANALYSIS OF BONE MORPHOGENETIC PROTEINSR01AR042236 · NIAMS · STANFORD UNIVERSITY · PI KINGSLEY, DAVID M · 1993 to 2001
$915k
NIAMS NIH HHS R01 AR042236NIAMS NIH HHS R37 AR042236
6 · The paper itself

Abstract

Synovial joints are crucial for support and locomotion in vertebrates, and are the frequent site of serious skeletal defects and degenerative diseases in humans. Growth and differentiation factor 5 (Gdf5) is one of the earliest markers of joint formation, is required for normal joint development in both mice and humans, and has been genetically linked to risk of common osteoarthritis in Eurasian populations. Here, we systematically survey the mouse Gdf5 gene for regulatory elements controlling expression in synovial joints. We identify separate regions of the locus that control expression in axial tissues, in proximal versus distal joints in the limbs, and in remarkably specific sub-sets of composite joints like the elbow. Predicted transcription factor binding sites within Gdf5 regulatory enhancers are required for expression in particular joints. The multiple enhancers that control Gdf5 expression in different joints are distributed over a hundred kilobases of DNA, including regions both upstream and downstream of Gdf5 coding exons. Functional rescue tests in mice confirm that the large flanking regions are required to restore normal joint formation and patterning. Orthologs of these enhancers are located throughout the large genomic region previously associated with common osteoarthritis risk in humans. The large array of modular enhancers for Gdf5 provide a new foundation for studying the spatial specificity of joint patterning in vertebrates, as well as new candidates for regulatory regions that may also influence osteoarthritis risk in human populations.

Indexed as

AnimalsBinding SitesExonsExtremitiesGrowth Differentiation Factor 5HeadHumansJointsKneeMiceOsteoarthritisRegulatory Sequences, Nucleic AcidShoulderSkeletonSynovial FluidToesGDF5 protein, humanGdf5 protein, mouseGrowth Differentiation Factor 5Transcription Factors

Identifiers

PMID27902701
PMCPMC5130176
OpenAlexW2558556020

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.