Evidence map›Paper›PMID 27902306›Full record

ArticleInternational journal of systematic and evolutionary microbiology2017

Description of Gloeomargarita lithophora gen. nov., sp. nov., a thylakoid-bearing, basal-branching cyanobacterium with intracellular carbonates, and proposal for Gloeomargaritales ord. nov.

David Moreira, Rosaluz Tavera, Karim Benzerara, Fériel Skouri-Panet, Estelle Couradeau, Emmanuelle Gérard, Céline Loussert Fonta, Eberto Novelo, Yvan Zivanovic, Purificación López-García

Open access · greenAbstract read
In one paragraph

Article in International journal of systematic and evolutionary microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 61 citations in OpenAlex.

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  12. Knockdown of Dinoflagellate Cellulose SynthaseFrontiers in microbiology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

David MoreiraUnité d'Ecologie, Systématique et Evolution, CNRS UMR 8079, Université Paris-Sud/Paris-Saclay, AgroParisTech, 91400 Orsay, France.
Rosaluz TaveraFacultad de Ciencias, Universidad Nacional Autónoma de México, CDMX, Mexico.
Karim BenzeraraInstitut de Minéralogie, de Physique des Matériaux, et de Cosmochimie, Sorbonne Universités-UPMC Univ Paris 06, CNRS UMR 7590, MNHN, IRD UMR 206, Paris, France.
Fériel Skouri-PanetInstitut de Minéralogie, de Physique des Matériaux, et de Cosmochimie, Sorbonne Universités-UPMC Univ Paris 06, CNRS UMR 7590, MNHN, IRD UMR 206, Paris, France.
Estelle CouradeauPresent address: School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA.
Emmanuelle GérardGéobiosphère Actuelle et Primitive, Institut de Physique du Globe de Paris, CNRS UMR 7154, Université Paris Diderot, Sorbonne Paris Cité, Paris, France.
Céline Loussert FontaNestlé Research Center, Minerals and Imaging Group, P.O Box 44, Ch-1000 Lausanne 26, VD, Switzerland.
Eberto NoveloFacultad de Ciencias, Universidad Nacional Autónoma de México, CDMX, Mexico.
Yvan ZivanovicInstitut de Génétique et Microbiologie, CNRS UMR 8621, Université Paris-Sud/Paris-Saclay, 91405 Orsay, France.
Purificación López-GarcíaNestlé Research Center, Minerals and Imaging Group, P.O Box 44, Ch-1000 Lausanne 26, VD, Switzerland.
Centre National de la Recherche Scientifique · FRUniversité Paris-Sud · FRNestlé (Switzerland) · CHUniversidad Nacional Autónoma de México · MX

Funding

European Research Council 322669
6 · The paper itself

Abstract

A unicellular cyanobacterium, strain Alchichica-D10, was isolated from microbialites of the alkaline Lake Alchichica, Mexico. The cells were short rods (3.9±0.6 µm in length and 1.1±0.1 µm in width) forming biofilms of intense emerald green colour. They exhibited red autofluorescence under UV light excitation. UV-visible absorption spectra revealed that they contain chlorophyll a and phycocyanin, and electron microscopy showed the presence of thylakoids. The strain grew within a temperature range of 15-30 °C. Genomic DNA G+C content was 52.2 mol%. The most remarkable feature of this species was its granular cytoplasm, due to the presence of numerous intracellular spherical granules (16-26 per cell) with an average diameter of 270 nm. These granules, easily visible under scanning electron microscopy, were composed of amorphous carbonate containing Ca, Mg, Ba and Sr. A multi-gene phylogeny based on the analysis of 59 conserved protein markers supported robustly that this strain occupies a deep position in the cyanobacterial tree. Based on its phenotypic characters and phylogenetic position, strain Alchichica-D10 is considered to represent a new genus and novel species of cyanobacteria for which the name Gloeomargarita lithophora gen. nov., sp. nov. is proposed. The type strain is Alchichica-D10 (Culture Collection of Algae and Protozoa CCAP strain 1437/1; Collections de Cyanobactéries et Microalgues Vivantes of the Museum National d'Histoire Naturelle in Paris strain PMC 919.15). Furthermore, a new family, Gloeomargaritaceae, and a new order, Gloeoemargaritales, are proposed to accommodate this species under the International Code of Nomenclature for algae, fungi and plants.

Indexed as

PhylogenyBacterial Typing TechniquesBase CompositionCarbonatesChlorophyllChlorophyll ACyanobacteriaDNA, BacterialLakesMexicoPhycocyaninRNA, Ribosomal, 16SSequence Analysis, DNAThylakoidsCarbonatesChlorophyllChlorophyll ADNA, BacterialPhycocyaninRNA, Ribosomal, 16Scyanobacteria, phylogenyGloeomargarita

Identifiers

PMID27902306
PMCPMC5669459
OpenAlexW2600609819

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.