Evidence map›Paper›PMID 27902302›Full record

ArticleInternational journal of systematic and evolutionary microbiology2017

Polynucleobacter wuianus sp. nov., a free-living freshwater bacterium affiliated with the cryptic species complex PnecC.

Martin W Hahn, Lesley R Huymann, Ulrike Koll, Johanna Schmidt, Elke Lang, Matthias Hoetzinger

Abstract read
In one paragraph

Article in International journal of systematic and evolutionary microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Martin W HahnResearch Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
Lesley R HuymannResearch Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
Ulrike KollResearch Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
Johanna SchmidtResearch Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
Elke LangDSMZ - Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstraße 7B, D-38124 Braunschweig, Germany.
Matthias HoetzingerResearch Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
Universität Innsbruck · ATLeibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures · DE

Funding

Austrian Science Fund FWF I 482
6 · The paper itself

Abstract

Strain QLW-P1FAT50C-4T, isolated from a shallow, acidic freshwater pond located in the Austrian Alps at an altitude of 1300 m, was characterized by investigation of phenotypic, chemotaxonomic and genomic traits. As shown previously, phylogenetic analyses based on 16S rRNA gene sequences placed the strain in the cryptic species complex PnecC within the genus Polynucleobacter. The major fatty acids of the strain were C16 : 1ω7c and C18 : 1ω7c. The strain has a genome of 2.23 Mbp with a DNA G+C content of 44.9 mol%. The strain encodes a seemingly complete gene cluster for anoxygenic photosynthesis but lacks typical genes for CO2 assimilation. In order to resolve the phylogenetic position of the strain within the species complex PnecC, concatenated partial sequences of eight housekeeping genes were analysed. The phylogenetic reconstruction obtained did not place strain QLW-P1FAT50C-4T close to any of the five previously described species within subcluster PnecC. Pairwise average nucleotide identity (ANI) comparisons of whole-genome sequences suggested that strain QLW-P1FAT50C-4T (=DSM 24008T=CIP 111100T) represents a novel species, for which we propose the name Polynucleobacter wuianus sp. nov.

Indexed as

PhylogenyAustriaBacterial Typing TechniquesBase CompositionBurkholderiaceaeDNA, BacterialFatty AcidsFresh WaterRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialFatty AcidsRNA, Ribosomal, 16S

Identifiers

PMID27902302
PMCPMC5354265
OpenAlexW2551213133

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.