Evidence map›Paper›PMID 27901085›Full record

ArticleScientific reports2016

Wide variation in susceptibility of transmitted/founder HIV-1 subtype C Isolates to protease inhibitors and association with in vitro replication efficiency.

Katherine A Sutherland, Dami A Collier, Daniel T Claiborne, Jessica L Prince, Martin J Deymier, Richard A Goldstein, Eric Hunter, Ravindra K Gupta

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Novel Protease Inhibitors Containing C-5-ModifiedAntimicrobial agents and chemotherapy · 2019
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Katherine A SutherlandDivision of Infection and Immunity, UCL, London, UK.
Dami A CollierEmory Vaccine Centre, Atlanta GA, USA.
Daniel T ClaiborneEmory Vaccine Centre, Atlanta GA, USA.
Jessica L PrinceEmory Vaccine Centre, Atlanta GA, USA.
Martin J DeymierEmory Vaccine Centre, Atlanta GA, USA.
Richard A GoldsteinEmory Vaccine Centre, Atlanta GA, USA.
Eric HunterEmory Vaccine Centre, Atlanta GA, USA.
Ravindra K GuptaEmory Vaccine Centre, Atlanta GA, USA.
Emory Healthcare · USUniversity College London · GB

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
CTL and HIV Polymorphisms in Heterosexual TransmissionR01AI064060 · NIAID · EMORY UNIVERSITY · PI GOEPFERT, PAUL A., HUNTER, ERIC · 2005 to 2019
$21.7M
Virologic Correlates of Heterosexual TransmissionR37AI051231 · NIAID · EMORY UNIVERSITY · PI HUNTER, ERIC · 2008 to 2017
$9.6M
Medical Research Council MC_PC_13056Medical Research Council MC_U117573805NIAID NIH HHS R01 AI064060NIAID NIH HHS R37 AI051231NIH HHS P51 OD011132Wellcome Trust 206440
6 · The paper itself

Abstract

The gag gene is highly polymorphic across HIV-1 subtypes and contributes to susceptibility to protease inhibitors (PI), a critical class of antiretrovirals that will be used in up to 2 million individuals as second-line therapy in sub Saharan Africa by 2020. Given subtype C represents around half of all HIV-1 infections globally, we examined PI susceptibility in subtype C viruses from treatment-naïve individuals. PI susceptibility was measured in a single round infection assay of full-length, replication competent MJ4/gag chimeric viruses, encoding the gag gene and 142 nucleotides of pro derived from viruses in 20 patients in the Zambia-Emory HIV Research Project acute infection cohort. Ten-fold variation in susceptibility to PIs atazanavir and lopinavir was observed across 20 viruses, with EC

Indexed as

Atazanavir SulfateDarunavirDNA ReplicationDrug Resistance, Viralgag Gene Products, Human Immunodeficiency VirusGenotypeHIV-1HIV InfectionsHIV Protease InhibitorsHumansLopinavirMicrobial Sensitivity TestsVirus ReplicationZambiaAtazanavir SulfateDarunavirgag Gene Products, Human Immunodeficiency VirusHIV Protease InhibitorsLopinavir

Identifiers

PMID27901085
PMCPMC5128871
OpenAlexW2559271924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.