Evidence map›Paper›PMID 27900369›Full record

ArticleCold Spring Harbor molecular case studies2016

Genomic profiling of multiple sequentially acquired tumor metastatic sites from an "exceptional responder" lung adenocarcinoma patient reveals extensive genomic heterogeneity and novel somatic variants driving treatment response.

Romi Biswas, Shaojian Gao, Constance M Cultraro, Tapan K Maity, Abhilash Venugopalan, Zied Abdullaev, Alexey K Shaytan, Corey A Carter, Anish Thomas, Arun Rajan and 15 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Pathogenic mutation hotspots in protein kinase domain structure.Protein science : a publication of the Protein Society · 2023
    Article
  2. Article
  3. Observational
  4. Review
  5. Review
  6. Genomic Underpinnings of Tumor Behavior inAmerican journal of respiratory and critical care medicine · 2020
    Article
  7. Article
  8. Review
  9. Article
  10. CDK12: an emerging therapeutic target for cancer.Journal of clinical pathology · 2018
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 1 country.

Romi BiswasThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Shaojian GaoThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Constance M CultraroThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Tapan K MaityThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Abhilash VenugopalanThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Zied AbdullaevLaboratory of Pathology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Alexey K ShaytanNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA.
Corey A CarterWalter Reed National Military Medical Center, Bethesda, Maryland 20889, USA.
Anish ThomasThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Arun RajanThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Young SongGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Stephanie PittsThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Kevin ChenThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Sara BassCancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Gaithersburg, Maryland 20848, USA.
Joseph BolandCancer Genomics Research Laboratory, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Gaithersburg, Maryland 20848, USA.
Ken-Ichi HanadaSurgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Jinqiu ChenLaboratory of Cell Biology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Paul S MeltzerGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Anna R PanchenkoNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA.
James C YangSurgery Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Svetlana PackLaboratory of Pathology, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Giuseppe GiacconeLombardi Comprehensive Cancer Center, Georgetown University, Washington, D.C. 20057, USA.
David S SchrumpThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Javed KhanGenetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Udayan GuhaThoracic and Gastrointestinal Oncology Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
National Cancer Institute · USCenter for Cancer Research · USDivision of Cancer Epidemiology and GeneticsGeorgetown University Medical Center · USNational Center for Biotechnology Information · USNational Institutes of Health · USWalter Reed National Military Medical Center · US

Funding

Cancer Genomics Technology DevelopmentZIABC011091 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MELTZER, PAUL S. · 2009 to 2025
$16.9M
Protein-protein binding: regulation and effect of disease mutationsZIALM090313 · NLM · NATIONAL LIBRARY OF MEDICINE · PI PANCHENKO, ANNA · 2013 to 2018
$5.2M
6 · The paper itself

Abstract

We used next-generation sequencing to identify somatic alterations in multiple metastatic sites from an "exceptional responder" lung adenocarcinoma patient during his 7-yr course of ERBB2-directed therapies. The degree of heterogeneity was unprecedented, with ∼1% similarity between somatic alterations of the lung and lymph nodes. One novel translocation,

Indexed as

AdenocarcinomaAdenocarcinoma of LungDown-RegulationErb-b2 Receptor Tyrosine KinasesGene Expression Regulation, NeoplasticGenes, erbB-2GenomicsHigh-Throughput Nucleotide SequencingHumansLung NeoplasmsMaleMiddle AgedMutationNeoplasm MetastasisTreatment OutcomeERBB2 protein, humanErb-b2 Receptor Tyrosine Kinasesneoplasm of the lung

Identifiers

PMID27900369
PMCPMC5111000
OpenAlexW2522417020

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.