Evidence map›Paper›PMID 27900368›Full record

ArticleCold Spring Harbor molecular case studies2016

Whole-exome sequencing reveals an inherited R566X mutation of the epithelial sodium channel β-subunit in a case of early-onset phenotype of Liddle syndrome.

Linda M Polfus, Eric Boerwinkle, Richard A Gibbs, Ginger Metcalf, Donna Muzny, Narayanan Veeraraghavan, Megan Grove, Sanjay Shete, Stephanie Wallace, Dianna Milewicz and 4 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. A Novel Frame-Shift Mutation inFrontiers in cardiovascular medicine · 2022
    Article
  5. Article
  6. Analyses of epithelial NaThe Journal of biological chemistry · 2019
    Article
  7. Liddle Syndrome: Review of the Literature and Description of a New Case.International journal of molecular sciences · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Linda M PolfusHuman Genetics Center, The University of Texas Health Science Center at Houston, Houston, Texas 70130, USA.
Eric BoerwinkleHuman Genetics Center, The University of Texas Health Science Center at Houston, Houston, Texas 70130, USA;; Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 70130, USA.
Richard A GibbsHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 70130, USA.
Ginger MetcalfHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 70130, USA.
Donna MuznyHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 70130, USA.
Narayanan VeeraraghavanHuman Genome Sequencing Center, Baylor College of Medicine, Houston, Texas 70130, USA.
Megan GroveHuman Genetics Center, The University of Texas Health Science Center at Houston, Houston, Texas 70130, USA.
Sanjay SheteDepartment of Biostatistics, MD Anderson Cancer Center, The University of Texas Health Science Center, Houston, Texas 77030, USA.
Stephanie WallaceDivision of Medical Genetics, Department of Internal Medicine, The University of Texas Health Science Center, Houston, Texas 77030, USA.
Dianna MilewiczDivision of Medical Genetics, Department of Internal Medicine, The University of Texas Health Science Center, Houston, Texas 77030, USA.
Neil HanchardMolecular and Human Genetics, Baylor College of Medicine, Houston, Texas 70130, USA.
James R LupskiMolecular and Human Genetics, Baylor College of Medicine, Houston, Texas 70130, USA.
Syed Shahrukh HashmiDepartment of Pediatrics, Children's Memorial Hermann Hospital, The University of Texas Health Science Center, Houston, Texas, Medical School, Texas 77030, USA.
Monesha Gupta-MalhotraDepartment of Pediatric Cardiology, Johns Hopkins All Children's Hospital, St. Petersburg, Florida 33701, USA.
Baylor College of Medicine · USThe University of Texas Health Science Center at Houston · USBaylor Genetics · USJohns Hopkins University · USMemorial Hermann · USThe University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Determination of genetics of childhood onset hypertensionK23HL089391 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI GUPTA, MONESHA · 2010 to 2014
$698k
Doris Duke Charitable Foundation 2013096NCI NIH HHS P30 CA016672NHLBI NIH HHS K23 HL089391
6 · The paper itself

Abstract

To comprehensively evaluate a European-American child with severe hypertension, whole-exome sequencing (WES) was performed on the child and parents, which identified causal variation of the proband's early-onset disease. The proband's hypertension was resistant to treatment, requiring a multiple drug regimen including amiloride, spironolactone, and hydrochlorothiazide. We suspected a monogenic form of hypertension because of the persistent hypokalemia with low plasma levels of renin and aldosterone. To address this, we focused on rare functional variants and indels, and performed gene-based tests incorporating linkage scores and allele frequency and filtered on deleterious functional mutations. Drawing upon clinical presentation, 27 genes were selected evidenced to cause monogenic hypertension and matched to the gene-based results. This resulted in the identification of a stop-gain mutation in an epithelial sodium channel (ENaC),

Indexed as

AdultAldosteroneAllelesAmilorideChild, PreschoolEpithelial Sodium ChannelsExomeExome SequencingFemaleGene FrequencyGerm-Line MutationHumansHydrochlorothiazideHypertensionHypokalemiaLiddle SyndromeAldosteroneAmilorideEpithelial Sodium ChannelsHydrochlorothiazideReninelevated diastolic blood pressureelevated mean arterial pressureelevated systolic blood pressure

Identifiers

PMID27900368
PMCPMC5111009
OpenAlexW2551597901

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.