Evidence map›Paper›PMID 27899619›Full record

ArticleNucleic acids research2017

The neXtProt knowledgebase on human proteins: 2017 update.

Pascale Gaudet, Pierre-André Michel, Monique Zahn-Zabal, Aurore Britan, Isabelle Cusin, Marcin Domagalski, Paula D Duek, Alain Gateau, Anne Gleizes, Valérie Hinard and 7 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed.

  1. Article
  2. Regulation of RNA-binding proteins by small biomolecules.Nature reviews. Molecular cell biology · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. HTNpedia: A Knowledge Base for Hypertension Research.Combinatorial chemistry & high throughput screening · 2024
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Pascale GaudetCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206 pascale.gaudet@sib.swiss.ORCID 0000-0003-1813-6857
Pierre-André MichelCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Monique Zahn-ZabalCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Aurore BritanCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Isabelle CusinCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Marcin DomagalskiCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Paula D DuekCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Alain GateauCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Anne GleizesCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Valérie HinardCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Valentine Rech de LavalCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
JinJin LinSun Yat-sen University, 135 Xingang W Rd, Haizhu, Guangzhou, Guangdong, China.
Frederic NikitinCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Mathieu SchaefferCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Daniel TeixeiraCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Lydie LaneCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.
Amos BairochCALIPHO group, SIB Swiss Institute of Bioinformatics, Geneva, Switzerland, 1206.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The neXtProt human protein knowledgebase (https://www.nextprot.org) continues to add new content and tools, with a focus on proteomics and genetic variation data. neXtProt now has proteomics data for over 85% of the human proteins, as well as new tools tailored to the proteomics community.Moreover, the neXtProt release 2016-08-25 includes over 8000 phenotypic observations for over 4000 variations in a number of genes involved in hereditary cancers and channelopathies. These changes are presented in the current neXtProt update. All of the neXtProt data are available via our user interface and FTP site. We also provide an API access and a SPARQL endpoint for more technical applications.

Indexed as

Databases, ProteinProteomicsGenetic Association StudiesGenetic VariationHumansInternetPhenotypeSoftwareWeb Browser

Identifiers

PMID27899619
PMCPMC5210547

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.