Evidence map›Paper›PMID 27897403›Full record

ArticleJournal of cachexia, sarcopenia and muscle2017

New genetic signatures associated with cancer cachexia as defined by low skeletal muscle index and weight loss.

Neil Johns, Cynthia Stretch, Benjamin H L Tan, Tora S Solheim, Sveinung Sørhaug, Nathan A Stephens, Ioannis Gioulbasanis, Richard J E Skipworth, D A Christopher Deans, Antonio Vigano and 9 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cachexia, sarcopenia and muscle, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Immunoregulation in cancer-associated cachexia.Journal of advanced research · 2024
    Review
  7. Article
  8. Association of the rs3917647 polymorphism of the SELP gene with malnutrition in gastric cancer.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2023
    Article
  9. Review
  10. The roles of P-selectin in cancer cachexia.Medical oncology (Northwood, London, England) · 2023
    Review
  11. Review
  12. Skeletal muscle omics signatures in cancer cachexia: perspectives and opportunities.Journal of the National Cancer Institute. Monographs · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 5 countries.

Neil JohnsDepartment of Clinical and Surgical Sciences, University of Edinburgh, Edinburgh, UK.
Cynthia StretchDepartment of Oncology, University of Alberta, Edmonton, Alberta, Canada.
Benjamin H L TanDepartment of Surgery, University Hospital Derby, Derby, UK.
Tora S SolheimDepartment of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.
Sveinung SørhaugDepartment of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.
Nathan A StephensDepartment of Clinical and Surgical Sciences, University of Edinburgh, Edinburgh, UK.
Ioannis GioulbasanisDepartment of Medical Oncology, University Hospital of Larissa, Larissa, Greece.
Richard J E SkipworthDepartment of Clinical and Surgical Sciences, University of Edinburgh, Edinburgh, UK.ORCID http://orcid.org/0000-0003-1349-9229
D A Christopher DeansDepartment of Clinical and Surgical Sciences, University of Edinburgh, Edinburgh, UK.
Antonio ViganoUniversity of McGill, Montreal, Canada.
James A RossDepartment of Clinical and Surgical Sciences, University of Edinburgh, Edinburgh, UK.
Oliver F BatheDepartment of Oncology, University of Calgary, Calgary, Alberta, Canada.
Michel L TremblayUniversity of McGill, Montreal, Canada.
Stein KaasaDepartment of Cancer Research and Molecular Medicine, Norwegian University of Science and Technology, Trondheim, Norway.
Florian StrasserDepartment of Family Medicine and Emergency Medicine, Laval University, Quebec, Canada.
Bruno GagnonDepartment of Internal Medicine, Cantonal Hospital, St. Gallen, Switzerland.
Vickie E BaracosDepartment of Oncology, University of Alberta, Edmonton, Alberta, Canada.
Sambasivarao DamarajuDepartment of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Alberta, Canada.
Kenneth C H FearonDepartment of Clinical and Surgical Sciences, University of Edinburgh, Edinburgh, UK.
University of Edinburgh · GBNorwegian University of Science and Technology · NOUniversity of Alberta · CAMcGill University · CAUniversité Laval · CAUniversity Hospital of Larissa · GRUniversity of Calgary · CAUniversity of Derby · GBUniversity of St.Gallen · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCachexia affects the majority with advanced cancer. Based on current demographic and clinical factors, it is not possible to predict who will develop cachexia or not. Such variation may, in part, be due to genotype. It has recently been proposed to extend the diagnostic criteria for cachexia to include a direct measure of low skeletal muscle index (LSMI) in addition to weight loss (WL). We aimed to explore our panel of candidate single nucleotide polymorphism (SNPs) for association with WL +/- computerized tomography-defined LSMI. We also explored whether the transcription in muscle of identified genes was altered according to such cachexia phenotype

methodsA retrospective cohort study design was used. Analysis explored associations of candidate SNPs with WL (n = 1276) and WL + LSMI (n = 943). Human muscle transcriptome (n = 134) was analysed using an Agilent platform.

resultsSingle nucleotide polymorphisms in the following genes showed association with WL alone: GCKR, LEPR, SELP, ACVR2B, TLR4, FOXO3, IGF1, CPN1, APOE, FOXO1, and GHRL. SNPs in LEPR, ACVR2B, TNF, and ACE were associated with concurrent WL + LSMI. There was concordance between muscle-specific expression for ACVR2B, FOXO1 and 3, LEPR, GCKR, and TLR4 genes and LSMI and/or WL (P < 0.05).

conclusionsThe rs1799964 in the TNF gene and rs4291 in the ACE gene are new associations when the definition of cachexia is based on a combination of WL and LSMI. These findings focus attention on pro-inflammatory cytokines and the renin-angiotensin system as biomarkers/mediators of muscle wasting in cachexia.

Indexed as

AdultAgedAged, 80 and overCachexiaFemaleGenotypeHumansMaleMiddle AgedMuscle, SkeletalMuscular AtrophyNeoplasmsPhenotypePolymorphism, Single NucleotideRetrospective StudiesTomography, X-Ray ComputedCachexiaCancerGeneticsPolymorphisms

Identifiers

PMID27897403
PMCPMC5356227
OpenAlexW2509713729

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.