Evidence map›Paper›PMID 27897387›Full record

ArticleChembiochem : a European journal of chemical biology2017

Small-Molecule-Induced and Cooperative Enzyme Assembly on a 14-3-3 Scaffold.

Anniek den Hamer, Lenne J M Lemmens, Minke A D Nijenhuis, Christian Ottmann, Maarten Merkx, Tom F A de Greef, Luc Brunsveld

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Designed Asymmetric Protein Assembly on a Symmetric Scaffold.Angewandte Chemie (International ed. in English) · 2020
    Article
  5. Review
  6. Modular bioengineered kinase sensorsChemical science · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Small-Molecule-Induced and Cooperative Enzyme Assembly on a 14-3-3 Scaffold.Chembiochem : a European journal of chemical biology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anniek den HamerLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.
Lenne J M LemmensLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.
Minke A D NijenhuisLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.
Christian OttmannLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.ORCID 0000-0001-7315-0315
Maarten MerkxLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.ORCID 0000-0001-9484-3882
Tom F A de GreefLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.ORCID 0000-0002-9338-284X
Luc BrunsveldLaboratory of Chemical Biology, Department of Biomedical Engineering and, Institute of Complex Molecular Systems, Eindhoven University of Technology, Den Dolech 2, 5612, AZ Eindhoven, Netherlands.ORCID 0000-0001-5675-511X
Eindhoven University of Technology · NL

Funding

European Research Council 677313
6 · The paper itself

Abstract

Scaffold proteins regulate cell signalling by promoting the proximity of putative interaction partners. Although they are frequently applied in cellular settings, fundamental understanding of them in terms of, amongst other factors, quantitative parameters has been lagging behind. Here we present a scaffold protein platform that is based on the native 14-3-3 dimeric protein and is controllable through the action of a small-molecule compound, thus permitting study in an in vitro setting and mathematical description. Robust small-molecule regulation of caspase-9 activity through induced dimerisation on the 14-3-3 scaffold was demonstrated. The individual parameters of this system were precisely determined and used to develop a mathematical model of the scaffolding concept. This model was used to elucidate the strong cooperativity of the enzyme activation mediated by the 14-3-3 scaffold. This work provides an entry point for the long-needed quantitative insights into scaffold protein functioning and paves the way for the optimal use of reengineered 14-3-3 proteins as chemically inducible scaffolds in synthetic systems.

Indexed as

14-3-3 ProteinsCaspase 3Caspase 9DimerizationEnzyme ActivationMutagenesis, Site-DirectedProtein EngineeringProtein Structure, QuaternaryRecombinant Fusion ProteinsSmall Molecule LibrariesSubstrate Specificity14-3-3 ProteinsCaspase 3Caspase 9Recombinant Fusion ProteinsSmall Molecule Libraries14-3-3 proteinscombinatorial inhibitioncooperative effectsdimerizationprotein engineeringprotein scaffolds

Identifiers

PMID27897387
PMCPMC5299510
OpenAlexW2558479656

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.