Evidence map›Paper›PMID 27896439›Full record

ArticlePlant reproduction2017

Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.

Antónia Gibalová, Lenka Steinbachová, Said Hafidh, Veronika Bláhová, Zuzana Gadiou, Christos Michailidis, Karel Műller, Roman Pleskot, Nikoleta Dupľáková, David Honys

Open access · greenAbstract read
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In one paragraph

Article in Plant reproduction, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. MdbZIP44-MdCPRF2-like-Horticulture research · 2024
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  8. The Association betweenInternational journal of molecular sciences · 2023
    Article
  9. Article
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  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Interactome of Arabidopsis Thaliana.Plants (Basel, Switzerland) · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Antónia GibalováLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Lenka SteinbachováLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Said HafidhLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Veronika BláhováLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Zuzana GadiouLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Christos MichailidisLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Karel MűllerLaboratory of Hormonal Regulations in Plants, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Roman PleskotLaboratory of Cell Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
Nikoleta DupľákováLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic.
David HonysLaboratory of Pollen Biology, Institute of Experimental Botany AS CR, v. v. i., Rozvojová 263, 165 02, Prague 6, Czech Republic. david@ueb.cas.cz.
Czech Academy of Sciences, Institute of Experimental Botany · CZNational Institute of Mental Health · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messagebZIP TF network in pollen. Transcriptional control of gene expression represents an important mechanism guiding organisms through developmental processes and providing plasticity towards environmental stimuli. Because of their sessile nature, plants require effective gene regulation for rapid response to variation in environmental and developmental conditions. Transcription factors (TFs) provide such control ensuring correct gene expression in spatial and temporal manner. Our work reports the interaction network of six bZIP TFs expressed in Arabidopsis thaliana pollen and highlights the potential functional role for AtbZIP18 in pollen. AtbZIP18 was shown to interact with three other pollen-expressed bZIP TFs-AtbZIP34, AtbZIP52, and AtbZIP61 in yeast two-hybrid assays. AtbZIP18 transcripts are highly expressed in pollen, and at the subcellular level, an AtbZIP18-GFP fusion protein was located in the nucleus and cytoplasm/ER. To address the role of AtbZIP18 in the male gametophyte, we performed phenotypic analysis of a T-DNA knockout allele, which showed slightly reduced transmission through the male gametophyte. Some of the phenotype defects in atbzip18 pollen, although observed at low penetrance, were similar to those seen at higher frequency in the T-DNA knockout of the interacting partner, AtbZIP34. To gain deeper insight into the regulatory role of AtbZIP18, we analysed atbzip18/- pollen microarray data. Our results point towards a potential repressive role for AtbZIP18 and its functional redundancy with AtbZIP34 in pollen.

Indexed as

ArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDimerizationDNA, PlantGene Expression Regulation, PlantMutagenesis, InsertionalPollenProtein BindingRecombinant Fusion ProteinsTrans-ActivatorsArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsbZIP18 protein, ArabidopsisbZIP34 protein, ArabidopsisDNA, PlantRecombinant Fusion ProteinsTrans-ActivatorsbZIPMale gametophytePollen developmentRegulatory networkTranscription factorsY2H

Identifiers

PMID27896439
OpenAlexW2557316994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.