Evidence map›Paper›PMID 27896428›Full record

ArticleHuman genetics2017

XCI-escaping gene KDM5C contributes to ovarian development via downregulating miR-320a.

Yi-Xi Sun, Yi-Xin Zhang, Dan Zhang, Chen-Ming Xu, Song-Chang Chen, Jun-Yu Zhang, Ye-Chun Ruan, Feng Chen, Run-Ju Zhang, Ye-Qing Qian and 9 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 4 pooled it
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 4 syntheses or guidelines pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Guideline
  3. Non-coding rnas in Turner syndrome: a systematic review.Revista paulista de pediatria : orgao oficial da Sociedade de Pediatria de Sao Paulo · 2024
    Pooled it
  4. Pooled it
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. What microRNAs could tell us about the human X chromosome.Cellular and molecular life sciences : CMLS · 2020
    Review
  12. Article
  13. Article
  14. Heterozygous Deletion of theFrontiers in genetics · 2019
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 2 countries.

Yi-Xi SunKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Yi-Xin ZhangKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Dan ZhangKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Chen-Ming XuKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Song-Chang ChenKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Jun-Yu ZhangInternational Peace Maternal and Child Health Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200030, China.
Ye-Chun RuanEpithelial Cell Biology Research Centre, School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong, China.
Feng ChenKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Run-Ju ZhangKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Ye-Qing QianKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Yi-Feng LiuKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Lu-Yang JinKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Tian-Tian YuKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Hai-Yan XuKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Yu-Qin LuoKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Xin-Mei LiuKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
Fei SunInternational Peace Maternal and Child Health Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200030, China.
Jian-Zhong ShengKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China.
He-Feng HuangKey Laboratory of Reproductive Genetics, Ministry of Education (Zhejiang University), Hangzhou, 310058, Zhejiang, China. huanghefg@hotmail.com.
Zhejiang University · CNWomen's Hospital, School of Medicine, Zhejiang University · CNShanghai Jiao Tong University · CNChinese University of Hong Kong · CNInternational Peace Maternity & Child Health Hospital · CNMinistry of Education · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mechanisms underlying female gonadal dysgenesis remain unclarified and relatively unstudied. Whether X-chromosome inactivation (XCI)-escaping genes and microRNAs (miRNAs) contribute to this condition is currently unknown. We compared 45,X Turner Syndrome women with 46,XX normal women, and investigated differentially expressed miRNAs in Turner Syndrome through plasma miRNA sequencing. We found that miR-320a was consistently upregulated not only in 45,X plasma and peripheral blood mononuclear cells (PBMCs), but also in 45,X fetal gonadal tissues. The levels of miR-320a in PBMCs from 45,X, 46,XX, 46,XY, and 47,XXY human subjects were inversely related to the expression levels of XCI-escaping gene KDM5C in PBMCs. In vitro models indicated that KDM5C suppressed miR-320a transcription by directly binding to the promoter of miR-320a to prevent histone methylation. In addition, we demonstrated that KITLG, an essential gene for ovarian development and primordial germ cell survival, was a direct target of miR-320a and that it was downregulated in 45,X fetal gonadal tissues. In conclusion, we demonstrated that downregulation of miR-320a by the XCI-escaping gene KDM5C contributed to ovarian development by targeting KITLG.

Indexed as

AdolescentAdultAmino Acid SequenceCell Line, TumorChromatin ImmunoprecipitationDown-RegulationFemaleGene Expression RegulationGene OntologyHEK293 CellsHistone DemethylasesHumansLeukocytes, MononuclearMicroRNAsOvaryPromoter Regions, GeneticHistone DemethylasesKDM5C protein, humanMicroRNAsMIRN320 microRNA, humanMIRN486 microRNA, human

Identifiers

PMID27896428
OpenAlexW2558321004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.