Evidence map›Paper›PMID 27895664›Full record

ReviewFrontiers in genetics2016

Application of Genomic Technologies to the Breeding of Trees.

Maria L Badenes, Angel Fernández I Martí, Gabino Ríos, María J Rubio-Cabetas

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  9. Review
  10. Article
  11. Review
  12. Inheritance of Rootstock Effects in Avocado (Frontiers in plant science · 2020
    Article
  13. Review
  14. Sequencing of a Wild Apple (G3 (Bethesda, Md.) · 2019
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Maria L BadenesInstituto Valenciano de Investigaciones Agrarias Valencia, Spain.
Angel Fernández I MartíHortofruticulture Department, Agrifood Research and Technology Centre of AragonZaragoza, Spain; Genome Center, University of California, Davis, Davis, CAUSA.
Gabino RíosInstituto Valenciano de Investigaciones Agrarias Valencia, Spain.
María J Rubio-CabetasHortofruticulture Department, Agrifood Research and Technology Centre of Aragon Zaragoza, Spain.
Centro de Investigación y Tecnología Agroalimentaria de Aragón · ESInstituto Valenciano de Investigaciones Agrarias · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent introduction of next generation sequencing (NGS) technologies represents a major revolution in providing new tools for identifying the genes and/or genomic intervals controlling important traits for selection in breeding programs. In perennial fruit trees with long generation times and large sizes of adult plants, the impact of these techniques is even more important. High-throughput DNA sequencing technologies have provided complete annotated sequences in many important tree species. Most of the high-throughput genotyping platforms described are being used for studies of genetic diversity and population structure. Dissection of complex traits became possible through the availability of genome sequences along with phenotypic variation data, which allow to elucidate the causative genetic differences that give rise to observed phenotypic variation. Association mapping facilitates the association between genetic markers and phenotype in unstructured and complex populations, identifying molecular markers for assisted selection and breeding. Also, genomic data provide

Indexed as

association mappinggenome sequencesinsertional mutant populationsnext generation sequencingRNA-seq

Identifiers

PMID27895664
PMCPMC5109026
OpenAlexW2551423226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.