Evidence map›Paper›PMID 27895543›Full record

ArticleClinical proteomics2016

Proteome analysis of excretory-secretory proteins of

Jorim Anak Ujang, Soon Hong Kwan, Mohd Nazri Ismail, Boon Huat Lim, Rahmah Noordin, Nurulhasanah Othman

Open access · goldAbstract read
In one paragraph

Article in Clinical proteomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Update on laboratory diagnosis of amoebiasis.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019
    Review
  7. The American journal of tropical medicine and hygiene · 2018
    Article
  8. Dynamic secretome ofMolecular & cellular proteomics : MCP · 2018
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jorim Anak UjangInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, 11800 Gelugor, Penang Malaysia.
Soon Hong KwanAnalytical Biochemistry Research Centre, Universiti Sains Malaysia, 11800 Gelugor, Penang Malaysia.
Mohd Nazri IsmailAnalytical Biochemistry Research Centre, Universiti Sains Malaysia, 11800 Gelugor, Penang Malaysia.
Boon Huat LimSchool of Health Sciences, Universiti Sains Malaysia, 16150 Kubang Kerian, Kelantan Malaysia.
Rahmah NoordinInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, 11800 Gelugor, Penang Malaysia.
Nurulhasanah OthmanInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, 11800 Gelugor, Penang Malaysia.
Universiti Sains Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExcretory-secretory (ES) proteins of

methods

resultsA complementary list of 219 proteins was identified; this comprised 201 proteins detected by LC-ESI-MS/MS and 107 proteins by LC-MALDI-TOF/TOF. Of the 219 proteins, 89 were identified by both mass-spectrometry systems, while 112 and 18 proteins were detected exclusively by LC-ESI-MS/MS and LC-MALDI-TOF/TOF respectively. Biological protein functional analysis using PantherDB showed that 27% of the proteins were involved in metabolic processes. Using molecular functional and cellular component analyses, 35% of the proteins were found to be involved in catalytic activity, and 21% were associated with the cell parts.

conclusionThis study showed that complementary use of LC-ESI-MS/MS and LC-MALDI-TOF/TOF has improved the identification of ES proteins. The results have increased our understanding of the types of proteins excreted/secreted by the amoeba and provided further evidence of the involvement of ES proteins in intestinal colonisation and evasion of the host immune system, as well as in encystation and excystation of the parasite.

Indexed as

Entamoeba histolyticaExcretory-secretory (ES) proteinsLC–ESI–MS/MSLC–MALDI–TOF/TOF

Identifiers

PMID27895543
PMCPMC5120466
OpenAlexW2551600712

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.