Evidence map›Paper›PMID 27893965›Full record

ReviewAnnual review of genetics2016

Single-Cell and Single-Molecule Analysis of Gene Expression Regulation.

Maria Vera, Jeetayu Biswas, Adrien Senecal, Robert H Singer, Hye Yoon Park

Open access · bronzeAbstract readReview
In one paragraph

Review in Annual review of genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 114 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. DNA forensics at forty: the way forward.International journal of legal medicine · 2025
    Review
  5. Article
  6. Origin of the clock inFrontiers in molecular biosciences · 2025
    Review
  7. Article
  8. Aberrant pre-mRNA processing in cancer.The Journal of experimental medicine · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Quantifying information of intracellular signaling: progress with machine learning.Reports on progress in physics. Physical Society (Great Britain) · 2022
    Review
  19. Article
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Maria VeraDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, New York, NY 10461; email: maria.vera@einstein.yu.edu , jeetayu.biswas@med.einstein.yu.edu , adrien.senecal@einstein.yu.edu , robert.singer@einstein.yu.edu.
Jeetayu BiswasDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, New York, NY 10461; email: maria.vera@einstein.yu.edu , jeetayu.biswas@med.einstein.yu.edu , adrien.senecal@einstein.yu.edu , robert.singer@einstein.yu.edu.
Adrien SenecalDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, New York, NY 10461; email: maria.vera@einstein.yu.edu , jeetayu.biswas@med.einstein.yu.edu , adrien.senecal@einstein.yu.edu , robert.singer@einstein.yu.edu.
Robert H SingerDepartment of Anatomy and Structural Biology, Albert Einstein College of Medicine, New York, NY 10461; email: maria.vera@einstein.yu.edu , jeetayu.biswas@med.einstein.yu.edu , adrien.senecal@einstein.yu.edu , robert.singer@einstein.yu.edu.
Hye Yoon ParkDepartment of Physics and Astronomy, Seoul National University, Seoul, 08826, Korea; email: hyeyoon.park@snu.ac.kr.
Albert Einstein College of Medicine · USJanelia Research Campus · USSeoul National University · KR

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Mechanism of MRNA Localization and Localized Translation in NeuronsR01NS083085 · NINDS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Sulagna Das, Robert H Singer · 2013 to 2026
$9.0M
RNA TRANSPORT AND LOCALIZATION IN YEAST IN SITUR01GM057071 · NIGMS · YESHIVA UNIVERSITY · PI SINGER, ROBERT H · 1998 to 2019
$5.7M
NIGMS NIH HHS R01 GM057071NIGMS NIH HHS T32 GM007288NINDS NIH HHS R01 NS083085
6 · The paper itself

Abstract

Recent advancements in single-cell and single-molecule imaging technologies have resolved biological processes in time and space that are fundamental to understanding the regulation of gene expression. Observations of single-molecule events in their cellular context have revealed highly dynamic aspects of transcriptional and post-transcriptional control in eukaryotic cells. This approach can relate transcription with mRNA abundance and lifetimes. Another key aspect of single-cell analysis is the cell-to-cell variability among populations of cells. Definition of heterogeneity has revealed stochastic processes, determined characteristics of under-represented cell types or transitional states, and integrated cellular behaviors in the context of multicellular organisms. In this review, we discuss novel aspects of gene expression of eukaryotic cells and multicellular organisms revealed by the latest advances in single-cell and single-molecule imaging technology.

Indexed as

Gene Expression RegulationAnimalsChromatinCytoplasmGene Expression ProfilingHumansPromoter Regions, GeneticProtein BiosynthesisRNA, MessengerSingle-Cell AnalysisStem CellsTranscription FactorsTranscription, GeneticChromatinRNA, MessengerTranscription Factorsgene expressionmRNA localizationsingle cellsingle-molecule imagingtranscriptiontranslation

Identifiers

PMID27893965
PMCPMC5149423
OpenAlexW2263901413

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.