Evidence map›Paper›PMID 27892470›Full record

ArticleScientific reports2016

Vertical Magnetic Separation of Circulating Tumor Cells for Somatic Genomic-Alteration Analysis in Lung Cancer Patients.

Chang Eun Yoo, Jong-Myeon Park, Hui-Sung Moon, Je-Gun Joung, Dae-Soon Son, Hyo-Jeong Jeon, Yeon Jeong Kim, Kyung-Yeon Han, Jong-Mu Sun, Keunchil Park and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Chang Eun YooSamsung Biomedical Research Institute (SBRI), Samsung Advanced Institute of Technology (SAIT), Samsung Electronics Co. Ltd., Seoul 06351, Korea.
Jong-Myeon ParkSamsung Electronics Co. Ltd., Suwon, 16677, Korea.
Hui-Sung MoonSamsung Biomedical Research Institute (SBRI), Samsung Advanced Institute of Technology (SAIT), Samsung Electronics Co. Ltd., Seoul 06351, Korea.
Je-Gun JoungSamsung Genome Institute (SGI), Samsung Medical Center (SMC), Seoul 06351, Korea.
Dae-Soon SonSamsung Biomedical Research Institute (SBRI), Samsung Advanced Institute of Technology (SAIT), Samsung Electronics Co. Ltd., Seoul 06351, Korea.
Hyo-Jeong JeonSamsung Genome Institute (SGI), Samsung Medical Center (SMC), Seoul 06351, Korea.
Yeon Jeong KimSamsung Biomedical Research Institute (SBRI), Samsung Advanced Institute of Technology (SAIT), Samsung Electronics Co. Ltd., Seoul 06351, Korea.
Kyung-Yeon HanSamsung Biomedical Research Institute (SBRI), Samsung Advanced Institute of Technology (SAIT), Samsung Electronics Co. Ltd., Seoul 06351, Korea.
Jong-Mu SunDepartment of Medicine, Sungkyunkwan University School of Medicine, Suwon 16416, Korea.
Keunchil ParkDepartment of Medicine, Sungkyunkwan University School of Medicine, Suwon 16416, Korea.
Donghyun ParkSamsung Biomedical Research Institute (SBRI), Samsung Advanced Institute of Technology (SAIT), Samsung Electronics Co. Ltd., Seoul 06351, Korea.
Woong-Yang ParkSamsung Genome Institute (SGI), Samsung Medical Center (SMC), Seoul 06351, Korea.
Samsung (South Korea) · KRSamsung Medical Center · KRSungkyunkwan University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Efficient isolation and genetic analysis of circulating tumor cells (CTCs) from cancer patients' blood is a critical step for clinical applications using CTCs. Here, we report a novel CTC-isolation method and subsequent genetic analysis. CTCs from the blood were complexed with magnetic beads coated with antibodies against the epithelial cell adhesion molecule (EpCAM) and separated vertically on a density-gradient medium in a modified well-plate. The recovery rate of model CTCs was reasonable and the cell purity was enhanced dramatically when compared to those parameters obtained using a conventional magnetic isolation method. CTCs were recovered from an increased number of patient samples using our magnetic system vs. the FDA-approved CellSearch system (100% vs. 33%, respectively). In 8 of 13 cases, targeted deep sequencing analysis of CTCs revealed private point mutations present in CTCs but not in matched tumor samples and white blood cells (WBCs), which was also validated by droplet digital PCR. Copy-number alterations in CTCs were also observed in the corresponding tumor tissues for some patients. In this report, we showed that CTCs isolated by the EpCAM-based method had complex and diverse genetic features that were similar to those of tumor samples in some, but not all, cases.

Indexed as

AllelesAntibodies, MonoclonalAntigens, NeoplasmCell Line, TumorDNA Copy Number VariationsEpithelial Cell Adhesion MoleculeGene ExpressionGene FrequencyHumansImmunomagnetic SeparationLung NeoplasmsNeoplasm ProteinsNeoplastic Cells, CirculatingPoint MutationProtein BindingAntibodies, MonoclonalAntigens, NeoplasmEPCAM protein, humanEpithelial Cell Adhesion MoleculeNeoplasm Proteins

Identifiers

PMID27892470
PMCPMC5124952
OpenAlexW2559041389

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.