Evidence map›Paper›PMID 27889811›Full record

ArticleMicrobial ecology2017

Bacterial Diversity Patterns Differ in Soils Developing in Sub-tropical and Cool-Temperate Ecosystems.

Shankar G Shanmugam, Zenaida V Magbanua, Mark A Williams, Kamlesh Jangid, William B Whitman, Daniel G Peterson, William L Kingery

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Diversity and distribution of COScientific reports · 2022
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Shankar G ShanmugamDepartment of Plant and Soil Sciences, Mississippi State University, 117 Dorman Hall, Mississippi State, MS, 39762, USA. sg383@msstate.edu.
Zenaida V MagbanuaDepartment of Plant and Soil Sciences, Mississippi State University, 117 Dorman Hall, Mississippi State, MS, 39762, USA.
Mark A WilliamsCollege of Agriculture and Life Sciences, Virginia Polytechnic and State University, Horticulture, 301 Latham Hall, Blacksburg, VA, 24060, USA.
Kamlesh JangidMicrobial Culture Collection, National Centre for Cell Science, Pune, 411007, Maharashtra, India.
William B WhitmanDepartment of Microbiology, University of Georgia, 527 Biological Sciences, Athens, GA, 30602, USA.
Daniel G PetersonDepartment of Plant and Soil Sciences, Mississippi State University, 117 Dorman Hall, Mississippi State, MS, 39762, USA.
William L KingeryDepartment of Plant and Soil Sciences, Mississippi State University, 117 Dorman Hall, Mississippi State, MS, 39762, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial diversity patterns have been surveyed in many different soils and ecosystems, but we are unaware of studies comparing similar soils developing from similar parent materials in contrasting climates. In 2008, developmental chronosequences with ages ranging from 105 to 500,000 years across Georgia (GA) and Michigan (MI) were studied to investigate how bacterial community composition and diversity change as a result of local environmental gradients that develop during pedogenesis. Geographic factors were studied between and within locations spanning two scales: (1) regionally between 0.1 and 50 and (2) ∼1700 km apart. The diversity was surveyed using high-throughput pyrosequencing, and variance partitioning was used to describe the effects of spatial, environmental, and spatio-environmental factors on bacterial community composition. At the local scale, variation in bacterial communities was most closely related to environmental factors (r

Indexed as

EcosystemSoil MicrobiologyBacteriaBase SequenceBiodiversityClimateDNA, BacterialGeographyGeorgiaMichiganMicrobiotaPlantsPolymerase Chain ReactionRNA, Ribosomal, 16SSequence Analysis, DNASoilDNA, BacterialRNA, Ribosomal, 16SSoil16S rRNA sequencingBacterial diversityBiogeographyEcosystem developmentMicrobial ecologySoil nutrients

Identifiers

PMID27889811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.