Evidence map›Paper›PMID 27888801›Full record

ArticleOncotarget2017

Common profiles of Notch signaling differentiate disease-free survival in luminal type A and triple negative breast cancer.

Magdalena Orzechowska, Dorota Jędroszka, Andrzej K Bednarek

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

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  5. Combined Scutellarin and CFrontiers in oncology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Magdalena OrzechowskaDepartment of Molecular Carcinogenesis, Medical University of Lodz, Lodz, 90-752, Poland.
Dorota JędroszkaDepartment of Molecular Carcinogenesis, Medical University of Lodz, Lodz, 90-752, Poland.
Andrzej K BednarekDepartment of Molecular Carcinogenesis, Medical University of Lodz, Lodz, 90-752, Poland.
Medical University of Lodz · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer (BC) is characterized by high heterogeneity regarding its biology and clinical characteristics. The Notch pathway regulates such processes as organ modeling and epithelial-to-mesenchymal transition (EMT).The aim of the study was to determine the effect of differential expression of Notch members on disease-free survival (DFS) in luminal type A (lumA) and triple negative (TN) BC.The differential expression of 19 Notch members was examined in a TCGA BC cohort. DFS analysis was performed using the log-rank test (p<0.05). Biological differences between DFS groups were determined with Gene Set Enrichment Analysis (GSEA) (tTest, FDR<0.25). Common expression profiles according to Notch signaling were examined using ExpressCluster (K-means, mean centered, Euclidean distance metric).The overexpression of HES1, LFNG and PSEN1 was found to be favorable for DFS in lumA, and lowered expression favorable for DFS in TN.GSEA analysis showed that differential Notch signaling is associated with cell cycle, tissue architecture and remodeling. Particularly, targets of E2F, early stage S phase transcription factor, were upregulated in the lumA unfavorable group and the TN favorable group differentiated on a basis of HES1 and PSEN1 expression.Summarizing, our analysis show significance of Notch signaling in BRCA progression through triggering EMT. Moreover, identification of numerous genes which overexpression is associated with disease recurrence may serve as a source of potential targets for a new anticancer therapy.

Indexed as

Gene Regulatory NetworksCell Line, TumorCohort StudiesDisease-Free SurvivalFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGlycosyltransferasesHumansPresenilin-1PrognosisReceptors, NotchSignal TransductionTranscription Factor HES-1Triple Negative Breast NeoplasmsGlycosyltransferasesHES1 protein, humanLFNG protein, humanPresenilin-1PSEN1 protein, humanReceptors, NotchTranscription Factor HES-1breast neoplasmsdisease-free survivalepithelial-to-mesenchymal transitionNotch

Identifiers

PMID27888801
PMCPMC5351609
OpenAlexW2553976752

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.