ArticleMolecular plant pathology2018
A high-resolution genetic map of the cereal crown rot pathogen Fusarium pseudograminearum provides a near-complete genome assembly.
Article in Molecular plant pathology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed, 59 citations in OpenAlex.
- The TOX2 Gene Is Responsible for Conidiation and Full Virulence inCurrent issues in molecular biology · 2025Article
- Crown rot in wheat: pathogen biology, host responses, and management strategies.Stress biology · 2025Review
- Fusarium Genome Sequencing and Assembly.Methods in molecular biology (Clifton, N.J.) · 2025Article
- A fusarioid fungus forms mutualistic interactions with poplar trees that resemble ectomycorrhizal symbiosis.IMA fungus · 2025Article
- High molecular weight DNA extraction methods lead to high quality filamentous ascomycete fungal genome assemblies using Oxford Nanopore sequencing.Microbial genomics · 2022Article
- FunOrder: A robust and semi-automated method for the identification of essential biosynthetic genes through computational molecular co-evolution.PLoS computational biology · 2021Article
- Article
- TMT-based quantitative proteomic analysis reveals defense mechanism of wheat against the crown rot pathogen Fusarium pseudograminearum.BMC plant biology · 2021Article
- Analysis of Apoptosis-Related Genes Reveals that Apoptosis Functions in Conidiation and Pathogenesis ofmSphere · 2021Article
- Heat Stress Tolerance GeneFrontiers in microbiology · 2021Article
- The bZIP transcription factor FpAda1 is essential for fungal growth and conidiation in Fusarium pseudograminearum.Current genetics · 2020Article
- TheFrontiers in genetics · 2020Article
- The ER Lumenal Hsp70 Protein FpLhs1 Is Important for Conidiation and Plant Infection inFrontiers in microbiology · 2019Article
- Fusarium crown rot caused by Fusarium pseudograminearum in cereal crops: recent progress and future prospects.Molecular plant pathology · 2018Article
- The cereal pathogen Fusarium pseudograminearum produces a new class of active cytokinins during infection.Molecular plant pathology · 2018Article
- High-resolution mapping of the recombination landscape of the phytopathogen Fusarium graminearum suggests two-speed genome evolution.Molecular plant pathology · 2018Article
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Fusarium pseudograminearum is an important pathogen of wheat and barley, particularly in semi-arid environments. Previous genome assemblies for this organism were based entirely on short read data and are highly fragmented. In this work, a genetic map of F. pseudograminearum has been constructed for the first time based on a mapping population of 178 individuals. The genetic map, together with long read scaffolding of a short read-based genome assembly, was used to give a near-complete assembly of the four F. pseudograminearum chromosomes. Large regions of synteny between F. pseudograminearum and F. graminearum, the related pathogen that is the primary causal agent of cereal head blight disease, were previously proposed in the core conserved genome, but the construction of a genetic map to order and orient contigs is critical to the validation of synteny and the placing of species-specific regions. Indeed, our comparative analyses of the genomes of these two related pathogens suggest that rearrangements in the F. pseudograminearum genome have occurred in the chromosome ends. One of these rearrangements includes the transposition of an entire gene cluster involved in the detoxification of the benzoxazolinone (BOA) class of plant phytoalexins. This work provides an important genomic and genetic resource for F. pseudograminearum, which is less well characterized than F. graminearum. In addition, this study provides new insights into a better understanding of the sexual reproduction process in F. pseudograminearum, which informs us of the potential of this pathogen to evolve.
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