Evidence map›Paper›PMID 27886299›Full record

ArticleChemical communications (Cambridge, England)2016

DNA nanotechnology for nucleic acid analysis: multifunctional molecular DNA machine for RNA detection.

A J Cox, H N Bengtson, K H Rohde, D M Kolpashchikov

Open access · greenAbstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. DNA Nanomachine (DNM) Biplex Assay for DifferentiatingInternational journal of molecular sciences · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Fluorogenic Templated Reaction Cascades for RNA Detection.Journal of the American Chemical Society · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

A J CoxChemistry Department, University of Central Florida, Orlando, 32816, Florida, USA and Burnett School of Biomedical Sciences, University of Central Florida, Orlando, 32816, Florida, USA. Dmitry.Kolpashchikov@ucf.edu.
H N BengtsonChemistry Department, University of Central Florida, Orlando, 32816, Florida, USA and Burnett School of Biomedical Sciences, University of Central Florida, Orlando, 32816, Florida, USA. Dmitry.Kolpashchikov@ucf.edu.
K H RohdeBurnett School of Biomedical Sciences, University of Central Florida, Orlando, 32816, Florida, USA. Dmitry.Kolpashchikov@ucf.edu.
D M KolpashchikovChemistry Department, University of Central Florida, Orlando, 32816, Florida, USA and Burnett School of Biomedical Sciences, University of Central Florida, Orlando, 32816, Florida, USA. Dmitry.Kolpashchikov@ucf.edu.
University of Central Florida · USDivision of Chemistry · US

Funding

Deoxyribozyme sensor-based diagnostics for Mycobacterium tuberculosisR15AI103880 · NIAID · UNIVERSITY OF CENTRAL FLORIDA · PI KOLPASHCHIKOV, DMITRY MIKHAYLOVICH · 2013 to 2013
$430k
NIAID NIH HHS R15 AI103880
6 · The paper itself

Abstract

The Nobel prize in chemistry in 2016 was awarded for 'the design and synthesis of molecular machines'. Here we designed and assembled a molecular machine for the detection of specific RNA molecules. An association of several DNA strands, named multifunctional DNA machine for RNA analysis (MDMR1), was designed to (i) unwind RNA with the help of RNA-binding arms, (ii) selectively recognize a targeted RNA fragment, (iii) attract a signal-producing substrate and (iv) amplify the fluorescent signal by catalysis. MDMR1 enabled detection of 16S rRNA at concentrations ∼24 times lower than that by a traditional deoxyribozyme probe.

Indexed as

NanotechnologyDNARNADNARNA

Identifiers

PMID27886299
PMCPMC5645153
OpenAlexW2551003786

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.