Evidence map›Paper›PMID 27886089›Full record

ArticleSensors (Basel, Switzerland)2016

Representation Method for Spectrally Overlapping Signals in Flow Cytometry Based on Fluorescence Pulse Time-Delay Estimation.

Wenchang Zhang, Xiaoping Lou, Xiaochen Meng, Lianqing Zhu

Abstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. [Automatic clustering method of flow cytometry data based onSheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi · 2018
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Wenchang ZhangSchool of Instrumentation Science & Opto-Electronics Engineering, Hefei University of Technology, Hefei 230009, China. baomuayi007@126.com.
Xiaoping LouBeijing Key Laboratory for Optoelectronic Measurement Technology, Beijing Information Science & Technology University, Beijing 100101, China. louxiaoping@bistu.edu.cn.
Xiaochen MengBeijing Key Laboratory for Optoelectronic Measurement Technology, Beijing Information Science & Technology University, Beijing 100101, China. mengxc@bistu.edu.cn.
Lianqing ZhuBeijing Key Laboratory for Optoelectronic Measurement Technology, Beijing Information Science & Technology University, Beijing 100101, China. zhulianqing@sina.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flow cytometry is being applied more extensively because of the outstanding advantages of multicolor fluorescence analysis. However, the intensity measurement is susceptible to the nonlinearity of the detection method. Moreover, in multicolor analysis, it is impossible to discriminate between fluorophores that spectrally overlap; this influences the accuracy of the fluorescence pulse signal representation. Here, we focus on spectral overlap in two-color analysis, and assume that the fluorescence follows the single exponential decay model. We overcome these problems by analyzing the influence of the spectral overlap quantitatively, which enables us to propose a method of fluorescence pulse signal representation based on time-delay estimation (between fluorescence and scattered pulse signals). First, the time delays are estimated using a modified chirp Z-transform (MCZT) algorithm and a fine interpolation of the correlation peak (FICP) algorithm. Second, the influence of hardware is removed via calibration, in order to acquire the original fluorescence lifetimes. Finally, modulated signals containing phase shifts associated with these lifetimes are created artificially, using a digital signal processing method, and reference signals are introduced in order to eliminate the influence of spectral overlap. Time-delay estimation simulation and fluorescence signal representation experiments are conducted on fluorescently labeled cells. With taking the potentially overlap of autofluorescence as part of the observed fluorescence spectrum, rather than distinguishing the individual influence, the results show that the calculated lifetimes with spectral overlap can be rectified from 8.28 and 4.86 ns to 8.51 and 4.63 ns, respectively, using the comprehensive approach presented in this work. These values agree well with the lifetimes (8.48 and 4.67 ns) acquired for cells stained with single-color fluorochrome. Further, these results indicate that the influence of spectral overlap can be eliminated effectively. Moreover, modulation, mixing with reference signals, and low-pass filtering are performed with a digital signal processing method, thereby obviating the need for a high-speed analog device and complex circuit system. Finally, the flexibility of the comprehensive method presented in this work is significantly higher than that of existing methods.

Indexed as

AlgorithmsFlow CytometryFluorescenceSignal Processing, Computer-Assisteddigital signal processingflow cytometryfluorescence lifetimespectrally overlapping signalstime-delay estimation

Identifiers

PMID27886089
PMCPMC5134636

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.