Evidence map›Paper›PMID 27883039›Full record

ArticleScientific reports2016

Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.

Anna M Lasica, Theodoros Goulas, Danuta Mizgalska, Xiaoyan Zhou, Iñaki de Diego, Mirosław Ksiazek, Mariusz Madej, Yonghua Guo, Tibisay Guevara, Magdalena Nowak and 13 more

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

  1. Article
  2. The Role ofAntibiotics (Basel, Switzerland) · 2026
    Review
  3. Article
  4. Virulence diversity amongJournal of oral microbiology · 2026
    Review
  5. Article
  6. Article
  7. Tyrosine phosphorylation coupling of one-carbon metabolism and virulence in an endogenous pathogen.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. TheJournal of oral microbiology · 2025
    Article
  12. Review
  13. Advances in the type IX secretion system: an exploration focusing onCurrent research in microbial sciences · 2025
    Review
  14. Article
  15. Article
  16. Article
  17. Structural Modeling of T9SS Outer Membrane Proteins and Their Complexes.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Anna M LasicaDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Theodoros GoulasProteolysis Lab, Structural Biology Unit ("María-de-Maeztu¨ Unit of Excellence), Molecular Biology Institute of Barcelona (CSIC), Barcelona Science Park, Barcelona, Catalonia, Spain.
Danuta MizgalskaDepartment of Microbiology, Faculty of Biochemistry, Biophysics, and Biotechnology, Jagiellonian University, Krakow, Poland.
Xiaoyan ZhouDepartment of Oral Biology, Faculty of Dentistry, University of Sydney, Sydney, NSW 2006, Australia.
Iñaki de DiegoProteolysis Lab, Structural Biology Unit ("María-de-Maeztu¨ Unit of Excellence), Molecular Biology Institute of Barcelona (CSIC), Barcelona Science Park, Barcelona, Catalonia, Spain.
Mirosław KsiazekDepartment of Microbiology, Faculty of Biochemistry, Biophysics, and Biotechnology, Jagiellonian University, Krakow, Poland.
Mariusz MadejDepartment of Microbiology, Faculty of Biochemistry, Biophysics, and Biotechnology, Jagiellonian University, Krakow, Poland.
Yonghua GuoDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Tibisay GuevaraProteolysis Lab, Structural Biology Unit ("María-de-Maeztu¨ Unit of Excellence), Molecular Biology Institute of Barcelona (CSIC), Barcelona Science Park, Barcelona, Catalonia, Spain.
Magdalena NowakDepartment of Microbiology, Faculty of Biochemistry, Biophysics, and Biotechnology, Jagiellonian University, Krakow, Poland.
Barbara PotempaDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Apoorv GoelDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Maryta SztukowskaDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Apurva T PrabhakarDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
Monika BzowskaDepartment of Cell Biochemistry, Faculty of Biochemistry, Biophysics, and Biotechnology, Jagiellonian University, Krakow, Poland.
Magdalena WidziolekDepartment of Microbiology, Faculty of Biochemistry, Biophysics, and Biotechnology, Jagiellonian University, Krakow, Poland.
Ida B ThøgersenInterdisciplinary Nanoscience Center (iNANO), and the Department of Molecular Biology, Aarhus University, Århus, DK-8000, Denmark.
Jan J EnghildInterdisciplinary Nanoscience Center (iNANO), and the Department of Molecular Biology, Aarhus University, Århus, DK-8000, Denmark.
Mary SimonianInstitute of Dental Research, Westmead Centre for Oral Health and Westmead Institute for Medical Research, Sydney, NSW 2145, Australia.
Arkadiusz W KulczykDepartment of Biological Chemistry and Molecular Pharmacology, Harvard University Medical School, Boston, MA, USA.
Ky-Anh NguyenDepartment of Oral Biology, Faculty of Dentistry, University of Sydney, Sydney, NSW 2006, Australia.
Jan PotempaDepartment of Oral Immunology and Infectious Diseases, University of Louisville School of Dentistry, Louisville, KY, USA.
F Xavier Gomis-RüthProteolysis Lab, Structural Biology Unit ("María-de-Maeztu¨ Unit of Excellence), Molecular Biology Institute of Barcelona (CSIC), Barcelona Science Park, Barcelona, Catalonia, Spain.

Funding

BACTERIAL PROTEINASES IN PERIODONTAL DISEASER01DE009761 · NIDCR · UNIVERSITY OF LOUISVILLE · PI POTEMPA, JAN S · 1991 to 2012
$3.8M
Bacterial peptidylarginine deiminase, a link between gums and joint diseaseR01DE022597 · NIDCR · UNIVERSITY OF LOUISVILLE · PI POTEMPA, JAN S · 2013 to 2023
$3.7M
NIDCR NIH HHS R01 DE009761NIDCR NIH HHS R01 DE022597
6 · The paper itself

Abstract

Porphyromonas gingivalis is a member of the human oral microbiome abundant in dysbiosis and implicated in the pathogenesis of periodontal (gum) disease. It employs a newly described type-IX secretion system (T9SS) for secretion of virulence factors. Cargo proteins destined for secretion through T9SS carry a recognition signal in the conserved C-terminal domain (CTD), which is removed by sortase PorU during translocation. Here, we identified a novel component of T9SS, PorZ, which is essential for surface exposure of PorU and posttranslational modification of T9SS cargo proteins. These include maturation of enzyme precursors, CTD removal and attachment of anionic lipopolysaccharide for anchorage in the outer membrane. The crystal structure of PorZ revealed two β-propeller domains and a C-terminal β-sandwich domain, which conforms to the canonical CTD architecture. We further documented that PorZ is itself transported to the cell surface via T9SS as a full-length protein with its CTD intact, independently of the presence or activity of PorU. Taken together, our results shed light on the architecture and possible function of a novel component of the T9SS. Knowledge of how T9SS operates will contribute to our understanding of protein secretion as part of host-microbiome interactions by dysbiotic members of the human oral cavity.

Indexed as

Bacterial Secretion SystemsMicrobiotaAdhesins, BacterialAmino Acid SequenceBacterial ProteinsCell MembraneCrystallography, X-RayCysteine EndopeptidasesEscherichia coliGene DeletionGingipain Cysteine EndopeptidasesHumansMouthPhenotypePigmentationPorphyromonas gingivalisAdhesins, BacterialBacterial ProteinsBacterial Secretion SystemsCysteine EndopeptidasesGingipain Cysteine EndopeptidasesProtein-Arginine Deiminases

Identifiers

PMID27883039
PMCPMC5121618

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.