Evidence map›Paper›PMID 27880818›Full record

ArticlePLoS pathogens2016

Merkel Cell Polyomavirus Small T Antigen Promotes Pro-Glycolytic Metabolic Perturbations Required for Transformation.

Christian Berrios, Megha Padi, Mark A Keibler, Donglim Esther Park, Vadim Molla, Jingwei Cheng, Soo Mi Lee, Gregory Stephanopoulos, John Quackenbush, James A DeCaprio

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Christian BerriosDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.
Megha PadiDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.
Mark A KeiblerDepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Donglim Esther ParkDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.
Vadim MollaDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.
Jingwei ChengDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.
Soo Mi LeeProgram in Virology, Graduate School of Arts and Sciences, Harvard University, Cambridge, Massachusetts, United States of America.ORCID http://orcid.org/0000-0003-3423-7965
Gregory StephanopoulosDepartment of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
John QuackenbushDepartment of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.ORCID http://orcid.org/0000-0002-2702-5879
James A DeCaprioDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.ORCID http://orcid.org/0000-0002-0896-167X
Harvard University · USBrigham and Women's Hospital · USMassachusetts Institute of Technology · USDana-Farber Cancer Institute · US

Funding

VIRAL ONCOPROTEIN PERTURBATION OF RB/E2F PATHWAYP01CA050661 · NCI · DANA-FARBER CANCER INSTITUTE · PI ROBERTS, THOMAS M · 1989 to 2013
$35.8M
RB-RELATED PROTEINS IN SV4OT AND E1A TRANSFORMATIONR01CA063113 · NCI · DANA-FARBER CANCER INSTITUTE · PI DECAPRIO, JAMES A. · 1994 to 2018
$5.0M
Using Networks to Assign Gene Function in Lung DiseaseR01HL111759 · NHLBI · DANA-FARBER CANCER INST · PI QUACKENBUSH, JOHN, SILVERMAN, EDWIN K · 2012 to 2015
$3.4M
Transforming Mechanisms of Merkel Cell Polyoma VirusR01CA173023 · NCI · DANA-FARBER CANCER INST · PI DECAPRIO, JAMES A. · 2013 to 2019
$2.3M
Hypoxia-induced Metabolic Changes in CancerR01CA160458 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI ILIOPOULOS, OTHON, STEPHANOPOULOS, GREGORY · 2012 to 2016
$1.6M
Elucidating modulators of hepatic metabolism by quantitative flux analysisR01DK075850 · NIDDK · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI STEPHANOPOULOS, GREGORY · 2006 to 2010
$1.5M
Modeling phenotypic transitions in gene expression state spaceK25HG006031 · NHGRI · DANA-FARBER CANCER INST · PI PADI, MEGHA · 2011 to 2015
$890k
Investigating Merkel Cell Polyomavirus Small T Antigen-Host InteractionsF31CA177274 · NCI · HARVARD MEDICAL SCHOOL · PI BERRIOS, CHRISTIAN JOSE · 2013 to 2015
$100k
NCI NIH HHS F31 CA177274NCI NIH HHS P01 CA050661NCI NIH HHS R01 CA063113NCI NIH HHS R01 CA160458NCI NIH HHS R01 CA173023NHGRI NIH HHS K25 HG006031NHLBI NIH HHS R01 HL111759NIDDK NIH HHS R01 DK075850
6 · The paper itself

Abstract

Merkel cell polyomavirus (MCPyV) is an etiological agent of Merkel cell carcinoma (MCC), a highly aggressive skin cancer. The MCPyV small tumor antigen (ST) is required for maintenance of MCC and can transform normal cells. To gain insight into cellular perturbations induced by MCPyV ST, we performed transcriptome analysis of normal human fibroblasts with inducible expression of ST. MCPyV ST dynamically alters the cellular transcriptome with increased levels of glycolytic genes, including the monocarboxylate lactate transporter SLC16A1 (MCT1). Extracellular flux analysis revealed increased lactate export reflecting elevated aerobic glycolysis in ST expressing cells. Inhibition of MCT1 activity suppressed the growth of MCC cell lines and impaired MCPyV-dependent transformation of IMR90 cells. Both NF-κB and MYC have been shown to regulate MCT1 expression. While MYC was required for MCT1 induction, MCPyV-induced MCT1 levels decreased following knockdown of the NF-κB subunit RelA, supporting a synergistic activity between MCPyV and MYC in regulating MCT1 levels. Several MCC lines had high levels of MYCL and MYCN but not MYC. Increased levels of MYCL was more effective than MYC or MYCN in increasing extracellular acidification in MCC cells. Our results demonstrate the effects of MCPyV ST on the cellular transcriptome and reveal that transformation is dependent, at least in part, on elevated aerobic glycolysis.

Indexed as

Antigens, Polyomavirus TransformingCarcinoma, Merkel CellCell LineCell Transformation, ViralComputational BiologyGene Expression ProfilingGene Expression Regulation, NeoplasticGlycolysisHumansImmunoblottingMerkel cell polyomavirusMetabolomicsReal-Time Polymerase Chain ReactionSkin NeoplasmsTransfectionAntigens, Polyomavirus Transforming

Identifiers

PMID27880818
PMCPMC5120958
OpenAlexW2553481386

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.