Evidence map›Paper›PMID 27879398›Full record

ArticleSLAS discovery : advancing life sciences R & D2017

Spectral Unmixing Plate Reader: High-Throughput, High-Precision FRET Assays in Living Cells.

Tory M Schaaf, Kurt C Peterson, Benjamin D Grant, David D Thomas, Gregory D Gillispie

Abstract read
In one paragraph

Article in SLAS discovery : advancing life sciences R & D, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Synergistic FRET assays for drug discovery targeting RyR2 channels.Journal of molecular and cellular cardiology · 2022
    Article
  10. Review
  11. Review
  12. Article
  13. Quantitative conformational profiling of kinase inhibitors reveals origins of selectivity for Aurora kinase activation states.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tory M Schaaf1 Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA.
Kurt C Peterson2 Fluorescence Innovations, Inc., Minneapolis, MN, USA.
Benjamin D Grant2 Fluorescence Innovations, Inc., Minneapolis, MN, USA.
David D Thomas1 Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN, USA.
Gregory D Gillispie2 Fluorescence Innovations, Inc., Minneapolis, MN, USA.

Funding

Structural Dynamics of Muscle Calcium ATPase RegulationR01GM027906 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI THOMAS, DAVID D · 1985 to 2016
$8.6M
Site-Directed Oxidative Modification of Muscle Protein Structural DynamicsR37AG026160 · NIA · UNIVERSITY OF MINNESOTA · PI THOMAS, DAVID D · 2011 to 2020
$4.5M
Chemistry-Biology Interface Training GrantT32GM008700 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI DISTEFANO, MARK D · 1999 to 2018
$4.0M
Calcium Pump Activators for Heart Failure TherapyR01HL129814 · NHLBI · UNIVERSITY OF MINNESOTA · PI THOMAS, DAVID D · 2015 to 2018
$3.2M
Live-Cell Fluorescence Lifetime FRET Assays for HTSR42DA037622 · NIDA · FLUORESCENCE INNOVATIONS, INC. · PI GILLISPIE, GREGORY DAVID · 2015 to 2016
$1.5M
NHLBI NIH HHS R01 HL129814NIA NIH HHS R37 AG026160NIDA NIH HHS R42 DA037622NIGMS NIH HHS R01 GM027906NIGMS NIH HHS T32 GM008700
6 · The paper itself

Abstract

We have developed a microplate reader that records a complete high-quality fluorescence emission spectrum on a well-by-well basis under true high-throughput screening (HTS) conditions. The read time for an entire 384-well plate is less than 3 min. This instrument is particularly well suited for assays based on fluorescence resonance energy transfer (FRET). Intramolecular protein biosensors with genetically encoded green fluorescent protein (GFP) donor and red fluorescent protein (RFP) acceptor tags at positions sensitive to structural changes were stably expressed and studied in living HEK cells. Accurate quantitation of FRET was achieved by decomposing each observed spectrum into a linear combination of four component (basis) spectra (GFP emission, RFP emission, water Raman, and cell autofluorescence). Excitation and detection are both conducted from the top, allowing for thermoelectric control of the sample temperature from below. This spectral unmixing plate reader (SUPR) delivers an unprecedented combination of speed, precision, and accuracy for studying ensemble-averaged FRET in living cells. It complements our previously reported fluorescence lifetime plate reader, which offers the feature of resolving multiple FRET populations within the ensemble. The combination of these two direct waveform-recording technologies greatly enhances the precision and information content for HTS in drug discovery.

Indexed as

Biosensing TechniquesHigh-Throughput Screening AssaysAlkanesulfonatesAzo CompoundsDrug DiscoveryEnzyme InhibitorsFluorescenceFluorescence Resonance Energy TransferGene ExpressionGenes, ReporterGreen Fluorescent ProteinsHEK293 CellsHumansImage CytometryIndolesLuminescent ProteinsAlkanesulfonatesATP2A1 protein, humanAzo CompoundsBHQ-1 compoundcyclopiazonic acidEnzyme InhibitorsGreen Fluorescent ProteinsIndolesLuminescent ProteinsRecombinant Fusion ProteinsRed Fluorescent ProteinSarcoplasmic Reticulum Calcium-Transporting ATPasesThapsigarginbiosensordrug screeningfluorescence lifetimeSERCAtop-read

Identifiers

PMID27879398
PMCPMC5506495

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.