Evidence map›Paper›PMID 27879264›Full record

ArticleCancer research2017

Differential Regulation of the Melanoma Proteome by eIF4A1 and eIF4E.

Cailin E Joyce, Adrienne G Yanez, Akihiro Mori, Akinori Yoda, Johanna S Carroll, Carl D Novina

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

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  12. Eukaryotic translation initiation factor 3 subunit b is a novel oncogenic factor in prostate cancer.Mammalian genome : official journal of the International Mammalian Genome Society · 2020
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  19. Translation initiation factors and their relevance in cancer.Current opinion in genetics & development · 2018
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Cailin E JoyceDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Adrienne G YanezDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Akihiro MoriProgram in Systems Biology and Program in Molecular Medicine, University of Massachusetts, Worcester, Massachusetts.
Akinori YodaDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Johanna S CarrollDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts.
Carl D NovinaDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts. carl_novina@dfci.harvard.edu.
Broad Institute · USHarvard University · US

Funding

University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
Postdoctoral Training Program in Cancer ImmunologyT32CA070083 · NCI · DANA-FARBER CANCER INSTITUTE · PI CANTOR, HARVEY · 1997 to 2012
$2.8M
Analysis of cap-dependent translational repression by microRNAs in oncogensisR01CA140986 · NCI · DANA-FARBER CANCER INST · PI NOVINA, CARL D · 2011 to 2015
$1.6M
Characterization of microRNA-mediated Repression of Translation InitiationF31GM087947 · NIGMS · HARVARD MEDICAL SCHOOL · PI YANEZ, ADRIENNE G. · 2009 to 2011
$97k
Transcriptomic signatures of Shwachman-Diamond Syndrome at single cell resolutionF32HL124941 · NHLBI · DANA-FARBER CANCER INST · PI JOYCE, CAILIN ELIZABETH · 2014 to 2014
$53k
Cancer Research UK 20411Medical Research Council MR/L00156X/1NCI NIH HHS R01 CA140986NCI NIH HHS T32 CA070083NHLBI NIH HHS F32 HL124941NIGMS NIH HHS F31 GM087947NIGMS NIH HHS T32 GM007266
6 · The paper itself

Abstract

Small molecules and antisense oligonucleotides that inhibit the translation initiation factors eIF4A1 and eIF4E have been explored as broad-based therapeutic agents for cancer treatment, based on the frequent upregulation of these two subunits of the eIF4F cap-binding complex in many cancer cells. Here, we provide support for these therapeutic approaches with mechanistic studies of eIF4F-driven tumor progression in a preclinical model of melanoma. Silencing eIF4A1 or eIF4E decreases melanoma proliferation and invasion. There were common effects on the level of cell-cycle proteins that could explain the antiproliferative effects in vitro Using clinical specimens, we correlate the common cell-cycle targets of eIF4A1 and eIF4E with patient survival. Finally, comparative proteomic and transcriptomic analyses reveal extensive mechanistic divergence in response to eIF4A1 or eIF4E silencing. Current models indicate that eIF4A1 and eIF4E function together through the 5'UTR to increase translation of oncogenes. In contrast, our data demonstrate that the common effects of eIF4A1 and eIF4E on translation are mediated by the coding region and 3'UTR. Moreover, their divergent effects occur through the 5'UTR. Overall, our work shows that it will be important to evaluate subunit-specific inhibitors of eIF4F in different disease contexts to fully understand their anticancer actions. Cancer Res; 77(3); 613-22. ©2016 AACR.

Indexed as

Cell Line, TumorEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4FGene Knockdown TechniquesGene Regulatory NetworksHumansMass SpectrometryMelanomaProteomeProteomicsSkin NeoplasmsEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4FProteome

Identifiers

PMID27879264
PMCPMC5362820
OpenAlexW2554016416

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.