Evidence map›Paper›PMID 27878975›Full record

ArticleTransboundary and emerging diseases2017

Multiplex RT-PCR and Automated Microarray for Detection of Eight Bovine Viruses.

O Lung, T Furukawa-Stoffer, K Burton Hughes, J Pasick, D P King, D Hodko

Open access · bronzeAbstract read
In one paragraph

Article in Transboundary and emerging diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

O LungLethbridge Laboratory, National Centres for Animal Disease, Canadian Food Inspection Agency, Lethbridge, AB, Canada.
T Furukawa-StofferLethbridge Laboratory, National Centres for Animal Disease, Canadian Food Inspection Agency, Lethbridge, AB, Canada.
K Burton HughesLethbridge Laboratory, National Centres for Animal Disease, Canadian Food Inspection Agency, Lethbridge, AB, Canada.
J PasickNational Centre for Foreign Animal Disease, Canadian Food Inspection Agency, Winnipeg, MB, Canada.
D P KingThe Pirbright Institute, Woking, Surrey, UK.
D HodkoNexogen, Inc., San Diego, CA, USA.
Canadian Food Inspection Agency · CANexogen (United States) · USThe Pirbright Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007037
6 · The paper itself

Abstract

Microarrays can be a useful tool for pathogen detection as it allow for simultaneous interrogation of the presence of a large number of genetic sequences in a sample. However, conventional microarrays require extensive manual handling and multiple pieces of equipment for printing probes, hybridization, washing and signal detection. In this study, a reverse transcription (RT)-PCR with an accompanying novel automated microarray for simultaneous detection of eight viruses that affect cattle [vesicular stomatitis virus (VSV), bovine viral diarrhoea virus type 1 and type 2, bovine herpesvirus 1, bluetongue virus, malignant catarrhal fever virus, rinderpest virus (RPV) and parapox viruses] is described. The assay accurately identified a panel of 37 strains of the target viruses and identified a mixed infection. No non-specific reactions were observed with a panel of 23 non-target viruses associated with livestock. Vesicular stomatitis virus was detected as early as 2 days post-inoculation in oral swabs from experimentally infected animals. The limit of detection of the microarray assay was as low as 1 TCID

Indexed as

AnimalsCattleCattle DiseasesCoinfectionMultiplex Polymerase Chain ReactionOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionSensitivity and SpecificityVirus DiseasesVirusesautomationbluetonguebovine herpesvirusbovine viral diarrhoeamalignant catarrhal fevermicroarraymultiplex PCRrinderpest

Identifiers

PMID27878975
PMCPMC7169755
OpenAlexW2550677947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.