Evidence map›Paper›PMID 27876845›Full record

ArticleScientific reports2016

Non-label immune cell state prediction using Raman spectroscopy.

Taro Ichimura, Liang-da Chiu, Katsumasa Fujita, Hiroaki Machiyama, Tomoyuki Yamaguchi, Tomonobu M Watanabe, Hideaki Fujita

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
9.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 74 citations in OpenAlex.

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  6. Imaging immunometabolismImmunometabolism (Cobham, Surrey) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Taro IchimuraLaboratory for Comprehensive Bioimaging, RIKEN QBiC, 6-2-3 Furuedai, Suita, Osaka, Japan.
Liang-da ChiuDepartment of Applied Physics, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Katsumasa FujitaDepartment of Applied Physics, Osaka University, 2-1 Yamadaoka, Suita, Osaka, Japan.
Hiroaki MachiyamaWPI, Immunology Frontier Research Center, Osaka University, 1-3 Yamadaoka, Suita, Osaka, Japan.
Tomoyuki YamaguchiWPI, Immunology Frontier Research Center, Osaka University, 1-3 Yamadaoka, Suita, Osaka, Japan.
Tomonobu M WatanabeLaboratory for Comprehensive Bioimaging, RIKEN QBiC, 6-2-3 Furuedai, Suita, Osaka, Japan.
Hideaki FujitaLaboratory for Comprehensive Bioimaging, RIKEN QBiC, 6-2-3 Furuedai, Suita, Osaka, Japan.
Osaka University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The acquired immune system, mainly composed of T and B lymphocytes, plays a key role in protecting the host from infection. It is important and technically challenging to identify cell types and their activation status in living and intact immune cells, without staining or killing the cells. Using Raman spectroscopy, we succeeded in discriminating between living T cells and B cells, and visualized the activation status of living T cells without labeling. Although the Raman spectra of T cells and B cells were similar, they could be distinguished by discriminant analysis of the principal components. Raman spectra of activated T cells with anti-CD3 and anti-CD28 antibodies largely differed compared to that of naïve T cells, enabling the prediction of T cell activation status at a single cell level. Our analysis revealed that the spectra of individual T cells gradually change from the pattern of naïve T cells to that of activated T cells during the first 24 h of activation, indicating that changes in Raman spectra reflect slow changes rather than rapid changes in cell state during activation. Our results indicate that the Raman spectrum enables the detection of dynamic changes in individual cell state scattered in a heterogeneous population.

Indexed as

AnimalsB-LymphocytesLymphocyte ActivationMice, Inbred BALB CMice, TransgenicSpectrum Analysis, RamanTime FactorsT-Lymphocytes

Identifiers

PMID27876845
PMCPMC5120326
OpenAlexW2556416675

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.