Evidence map›Paper›PMID 27875300›Full record

ArticleThe Journal of biological chemistry2016

The Fission Yeast Pre-mRNA-processing Factor 18 (prp18+) Has Intron-specific Splicing Functions with Links to G1-S Cell Cycle Progression.

Nagampalli Vijaykrishna, Geetha Melangath, Rakesh Kumar, Piyush Khandelia, Pushpinder Bawa, Raghavan Varadarajan, Usha Vijayraghavan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nagampalli VijaykrishnaFrom the Department of Microbiology and Cell Biology and.
Geetha MelangathFrom the Department of Microbiology and Cell Biology and.
Rakesh KumarFrom the Department of Microbiology and Cell Biology and.
Piyush KhandeliaFrom the Department of Microbiology and Cell Biology and.
Pushpinder BawaFrom the Department of Microbiology and Cell Biology and.
Raghavan Varadarajanthe Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India.
Usha VijayraghavanFrom the Department of Microbiology and Cell Biology and uvr@mcbl.iisc.ernet.in.
Indian Institute of Science Bangalore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fission yeast genome, which contains numerous short introns, is an apt model for studies on fungal splicing mechanisms and splicing by intron definition. Here we perform a domain analysis of the evolutionarily conserved Schizosaccharomyces pombe pre-mRNA-processing factor, SpPrp18. Our mutational and biophysical analyses of the C-terminal α-helical bundle reveal critical roles for the conserved region as well as helix five. We generate a novel conditional missense mutant, spprp18-5 To assess the role of SpPrp18, we performed global splicing analyses on cells depleted of prp18

Indexed as

Cell CycleCrystallography, X-RayIntronsModels, MolecularMutationProtein ConformationRNA, FungalRNA PrecursorsRNA SplicingSchizosaccharomycesSchizosaccharomyces pombe ProteinsSpliceosomesRNA, FungalRNA PrecursorsSchizosaccharomyces pombe Proteinsfunctional genomicsintron-specific splicingmolecular geneticsmutagenesisRNA splicingSchizosaccharomyces pombesplicing microarraysSpPrp18

Identifiers

PMID27875300
PMCPMC5207164
OpenAlexW2557026059

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.