Evidence map›Paper›PMID 27872278›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Reconstitution of a Mycobacterium tuberculosis proteostasis network highlights essential cofactor interactions with chaperone DnaK.

Tania J Lupoli, Allison Fay, Carolina Adura, Michael S Glickman, Carl F Nathan

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  11. Oxidative damage and delayed replication allow viableScience translational medicine · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. The unfoldase ClpC1 ofThe Journal of biological chemistry · 2020
    Article
  18. Article
  19. Role of ClpB FromFrontiers in microbiology · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Tania J LupoliDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY 10021.
Allison FayImmunology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.
Carolina AduraHigh-Throughput Screening and Spectroscopy Resource Center, The Rockefeller University, New York, NY 10065.
Michael S GlickmanImmunology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065.ORCID 0000-0001-7918-5164
Carl F NathanDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY 10021; cnathan@med.cornell.edu.
Cornell University · USMemorial Sloan Kettering Cancer Center · USRockefeller University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Viable but Nonculturable MtbU19AI111143 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI AUBE, JEFFREY, GLICKMAN, MICHAEL S · 2014 to 2020
$48.6M
IMMUNOLOGY RESEARCH TRAININGT32CA009149 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI RUDENSKY, ALEXANDER Y · 1985 to 2022
$4.0M
NCI NIH HHS P30 CA008748NCI NIH HHS T32 CA009149NIAID NIH HHS U19 AI111143
6 · The paper itself

Abstract

During host infection, Mycobacterium tuberculosis (Mtb) encounters several types of stress that impair protein integrity, including reactive oxygen and nitrogen species and chemotherapy. The resulting protein aggregates can be resolved or degraded by molecular machinery conserved from bacteria to eukaryotes. Eukaryotic Hsp104/Hsp70 and their bacterial homologs ClpB/DnaK are ATP-powered chaperones that restore toxic protein aggregates to a native folded state. DnaK is essential in Mycobacterium smegmatis, and ClpB is involved in asymmetrically distributing damaged proteins during cell division as a mechanism of survival in Mtb, commending both proteins as potential drug targets. However, their molecular partners in protein reactivation have not been characterized in mycobacteria. Here, we reconstituted the activities of the Mtb ClpB/DnaK bichaperone system with the cofactors DnaJ1, DnaJ2, and GrpE and the small heat shock protein Hsp20. We found that DnaJ1 and DnaJ2 activate the ATPase activity of DnaK differently. A point mutation in the highly conserved HPD motif of the DnaJ proteins abrogates their ability to activate DnaK, although the DnaJ2 mutant still binds to DnaK. The purified Mtb ClpB/DnaK system reactivated a heat-denatured model substrate, but the DnaJ HPD mutants inhibited the reaction. Finally, either DnaJ1 or DnaJ2 is required for mycobacterial viability, as is the DnaK-activating activity of a DnaJ protein. These studies lay the groundwork for strategies to target essential chaperone-protein interactions in Mtb, the leading cause of death from a bacterial infection.

Indexed as

ProteostasisAdenosine TriphosphatasesBacterial ProteinsHeat-Shock ProteinsHSP40 Heat-Shock ProteinsMolecular ChaperonesMycobacterium smegmatisMycobacterium tuberculosisAdenosine TriphosphatasesBacterial ProteinsDnaK protein, Mycobacterium smegmatisGrpE protein, BacteriaHeat-Shock ProteinsHSP40 Heat-Shock ProteinsMolecular ChaperoneschaperonesDnaJ proteinsDnaKM. tuberculosisproteostasis

Identifiers

PMID27872278
PMCPMC5150378
OpenAlexW2555012146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.