Evidence map›Paper›PMID 27872138›Full record

ArticleThe Journal of cell biology2016

MicroRNAs-103/107 coordinately regulate macropinocytosis and autophagy.

Jong Kook Park, Han Peng, Julia Katsnelson, Wending Yang, Nihal Kaplan, Ying Dong, Joshua Z Rappoport, CongCong He, Robert M Lavker

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. IFITM1/OVOL1 Axis Is a Novel Regulator of the Expansion of the Limbal Epithelial Stem/Early Transient Amplifying Cell Population.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  5. Article
  6. Article
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  8. Article
  9. Tumor-associated genetic amplifications impact extracellular vesicle miRNA cargo and their recruitment of nerves in head and neck cancer.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  10. Review
  11. Review
  12. Autophagy in the normal and diseased cornea.Experimental eye research · 2022
    Review
  13. Review
  14. Eph signaling is regulated by miRNA-210: Implications for corneal epithelial repair.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Jong Kook ParkDepartment of Dermatology, Northwestern University, Chicago, IL 60611.ORCID http://orcid.org/0000-0002-5616-1124
Han PengDepartment of Dermatology, Northwestern University, Chicago, IL 60611.
Julia KatsnelsonRush Medical Center, Chicago, IL 60615.
Wending YangDepartment of Dermatology, Northwestern University, Chicago, IL 60611.
Nihal KaplanDepartment of Dermatology, Northwestern University, Chicago, IL 60611.ORCID http://orcid.org/0000-0002-4552-5201
Ying DongDepartment of Dermatology, Northwestern University, Chicago, IL 60611.ORCID http://orcid.org/0000-0002-1650-6802
Joshua Z RappoportCenter for Advanced Microscopy and Nikon Imaging Center, Northwestern University, Chicago, IL 60611.
CongCong HeDepartment of Cell and Molecular Biology, Northwestern University, Chicago, IL 60611.ORCID http://orcid.org/0000-0001-5563-9096
Robert M LavkerDepartment of Dermatology, Northwestern University, Chicago, IL 60611 r-lavker@northwestern.edu.ORCID http://orcid.org/0000-0003-2570-9537
Northwestern University · USRush University Medical Center · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
CORNEAL EPITHELIAL STEM CELLSR01EY006769 · NEI · UNIVERSITY OF PENNSYLVANIA · PI LAVKER, ROBERT M · 1988 to 2014
$6.4M
The Role of Keratinocytes as Independent ThermosensorsP30AR057216 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GUITART, JOAN · 2009 to 2018
$6.0M
The Role of MicroRNAs in Corneal Epithelial HomeostasisR01EY019463 · NEI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LAVKER, ROBERT M · 2010 to 2022
$5.0M
A novel autophagy gene beclin 2 in the prevention of type 2 diabetes and obesityR00DK094980 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HE, CONGCONG · 2014 to 2016
$728k
A novel autophagy gene beclin 2 in the prevention of type 2 diabetes and obesityK99DK094980 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI HE, CONGCONG · 2012 to 2013
$180k
DEVELOPING VISUAL PATHWAYS DEFINED BY AN EPH/RTK LIGANDF32EY006769 · NEI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI BRAISTED, JANET E · 1996 to 1996
–
NCI NIH HHS P30 CA060553NEI NIH HHS F32 EY006769NEI NIH HHS R01 EY006769NEI NIH HHS R01 EY019463NIAMS NIH HHS P30 AR057216NIDDK NIH HHS K99 DK094980NIDDK NIH HHS R00 DK094980
6 · The paper itself

Abstract

Macropinocytosis, by which cells ingest large amounts of fluid, and autophagy, the lysosome-based catabolic process, involve vesicular biogenesis (early stage) and turnover (end stage). Much is known about early-stage events; however, our understanding of how the end stages of these processes are governed is incomplete. Here we demonstrate that the microRNA-103/107(miR-103/107) family, which is preferentially expressed in the stem cell-enriched limbal epithelium, coordinately regulates aspects of both these activities. Loss of miR-103/107 causes dysregulation of macropinocytosis with the formation of large vacuoles, primarily through up-regulation of Src, Ras, and Ankfy1. Vacuole accumulation is not a malfunction of early-stage autophagy; rather, miR-103/107 ensure proper end-stage autophagy by regulating diacylglycerol/protein kinase C and cyclin-dependent kinase 5 signaling, which enables dynamin to function in vacuole clearance. Our findings unveil a key biological function for miR-103/107 in coordinately suppressing macropinocytosis and preserving end-stage autophagy, thereby contributing to maintenance of a stem cell-enriched epithelium.

Indexed as

AutophagyPinocytosisAnimalsBiomarkersCell ProliferationDiglyceridesDynaminsEpithelial CellsHumansKeratinocytesLysosomesMembrane ProteinsMice, TransgenicMicroRNAsMicrotubule-Associated ProteinsPhosphate-Binding ProteinsANKFY1 protein, humanBiomarkersDiglyceridesDynaminsMAP1LC3B protein, humanMembrane ProteinsMicroRNAsMicrotubule-Associated ProteinsMIRN103 microRNA, humanMIRN107 microRNA, humanPhosphate-Binding Proteinsrab11 GTP-Binding Proteinsrab GTP-Binding ProteinsSHC3 protein, humanSrc Homology 2 Domain-Containing, Transforming Protein 3

Identifiers

PMID27872138
PMCPMC5146999
OpenAlexW2549951150

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.